Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GDF9O60383 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
GDF9O60383 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.11□□□□□ -1.75
GDF9O60383 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 RNA5SP22-201ENST00000365393 109 ntBASIC4.11□□□□□ -1.75
GDF9O60383 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.11□□□□□ -1.75
GDF9O60383 SNORA5A-201ENST00000384111 134 ntBASIC4.11□□□□□ -1.75
GDF9O60383 SNORD38C-201ENST00000384381 69 ntBASIC4.11□□□□□ -1.75
GDF9O60383 SNORA18-201ENST00000384416 132 ntBASIC4.11□□□□□ -1.75
GDF9O60383 RNU6-748P-201ENST00000384648 107 ntBASIC4.11□□□□□ -1.75
GDF9O60383 Y_RNA.565-201ENST00000384719 101 ntBASIC4.11□□□□□ -1.75
GDF9O60383 MIR30B-201ENST00000384850 88 ntBASIC4.11□□□□□ -1.75
GDF9O60383 MIR577-201ENST00000385196 96 ntBASIC4.11□□□□□ -1.75
GDF9O60383 RNU6-57P-201ENST00000411348 103 ntBASIC4.11□□□□□ -1.75
GDF9O60383 HMGN2P31-201ENST00000432430 273 ntBASIC4.11□□□□□ -1.75
GDF9O60383 AL441985.1-201ENST00000457727 251 ntBASIC4.11□□□□□ -1.75
GDF9O60383 AC113410.1-201ENST00000505029 247 ntBASIC4.11□□□□□ -1.75
GDF9O60383 RNU6-1098P-201ENST00000516772 96 ntBASIC4.11□□□□□ -1.75
GDF9O60383 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.11□□□□□ -1.75
GDF9O60383 MIR548Z-201ENST00000584743 97 ntBASIC4.11□□□□□ -1.75
GDF9O60383 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
GDF9O60383 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
GDF9O60383 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.11□□□□□ -1.75
GDF9O60383 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.11□□□□□ -1.75
GDF9O60383 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GDF9O60383 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GDF9O60383 AC007496.3-201ENST00000624987 3443 ntBASIC4.1□□□□□ -1.75
GDF9O60383 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GDF9O60383 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
GDF9O60383 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GDF9O60383 RNU6-655P-201ENST00000362858 107 ntBASIC4.1□□□□□ -1.75
GDF9O60383 SNORA2.2-201ENST00000365473 135 ntBASIC4.1□□□□□ -1.75
GDF9O60383 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GDF9O60383 RN7SKP156-201ENST00000410308 342 ntBASIC4.1□□□□□ -1.75
GDF9O60383 Y_RNA.607-201ENST00000410597 98 ntBASIC4.1□□□□□ -1.75
GDF9O60383 SNORA57.3-201ENST00000411095 141 ntBASIC4.1□□□□□ -1.75
GDF9O60383 RPL23AP46-201ENST00000438548 490 ntBASIC4.1□□□□□ -1.75
GDF9O60383 AC009238.1-201ENST00000442165 424 ntBASIC4.1□□□□□ -1.75
GDF9O60383 SNRPGP13-201ENST00000442212 177 ntBASIC4.1□□□□□ -1.75
GDF9O60383 AC009237.6-201ENST00000446969 424 ntBASIC4.1□□□□□ -1.75
GDF9O60383 RPS27P22-201ENST00000478056 241 ntBASIC4.1□□□□□ -1.75
GDF9O60383 RNU7-70P-201ENST00000516941 66 ntBASIC4.1□□□□□ -1.75
GDF9O60383 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.1□□□□□ -1.75
GDF9O60383 AC004486.1-201ENST00000546846 233 ntBASIC4.1□□□□□ -1.75
GDF9O60383 MIR3124-201ENST00000582636 67 ntBASIC4.1□□□□□ -1.75
GDF9O60383 AC091178.1-203ENST00000584586 279 ntBASIC4.1□□□□□ -1.75
GDF9O60383 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.1□□□□□ -1.75
GDF9O60383 U4atac.1-201ENST00000618345 95 ntBASIC4.1□□□□□ -1.75
GDF9O60383 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GDF9O60383 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GDF9O60383 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.1□□□□□ -1.75
GDF9O60383 AC017071.1-201ENST00000564407 2204 ntBASIC4.1□□□□□ -1.75
GDF9O60383 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GDF9O60383 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.1□□□□□ -1.75
GDF9O60383 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GDF9O60383 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GDF9O60383 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
GDF9O60383 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GDF9O60383 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.09□□□□□ -1.75
GDF9O60383 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.09□□□□□ -1.75
GDF9O60383 snoU2_19.1-201ENST00000362361 80 ntBASIC4.09□□□□□ -1.75
GDF9O60383 Y_RNA.155-201ENST00000363632 101 ntBASIC4.09□□□□□ -1.75
GDF9O60383 MIR183-201ENST00000384958 110 ntBASIC4.09□□□□□ -1.75
GDF9O60383 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.09□□□□□ -1.75
GDF9O60383 RNA5SP446-201ENST00000515955 82 ntBASIC4.09□□□□□ -1.75
GDF9O60383 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.09□□□□□ -1.75
GDF9O60383 MIR3117-201ENST00000584034 78 ntBASIC4.09□□□□□ -1.75
GDF9O60383 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
GDF9O60383 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
GDF9O60383 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
GDF9O60383 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.08□□□□□ -1.76
GDF9O60383 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.08□□□□□ -1.76
GDF9O60383 AL161912.2-201ENST00000565707 3007 ntBASIC4.08□□□□□ -1.76
GDF9O60383 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
GDF9O60383 MAPK10-320ENST00000641462 6696 ntBASIC4.08□□□□□ -1.76
GDF9O60383 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
GDF9O60383 Y_RNA.4-201ENST00000362333 112 ntBASIC4.08□□□□□ -1.76
GDF9O60383 Y_RNA.360-201ENST00000365512 102 ntBASIC4.08□□□□□ -1.76
GDF9O60383 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
GDF9O60383 RNU6-975P-201ENST00000384296 105 ntBASIC4.08□□□□□ -1.76
GDF9O60383 U8.11-201ENST00000384699 133 ntBASIC4.08□□□□□ -1.76
GDF9O60383 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GDF9O60383 RNU6-733P-201ENST00000410759 104 ntBASIC4.08□□□□□ -1.76
GDF9O60383 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
GDF9O60383 ABCF2P2-201ENST00000450549 296 ntBASIC4.08□□□□□ -1.76
GDF9O60383 RNA5SP246-201ENST00000458909 119 ntBASIC4.08□□□□□ -1.76
GDF9O60383 U8.18-201ENST00000459285 133 ntBASIC4.08□□□□□ -1.76
GDF9O60383 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.08□□□□□ -1.76
GDF9O60383 Y_RNA.705-201ENST00000516862 110 ntBASIC4.08□□□□□ -1.76
GDF9O60383 AC022655.2-201ENST00000577280 318 ntBASIC4.08□□□□□ -1.76
GDF9O60383 MIR4305-201ENST00000583252 102 ntBASIC4.08□□□□□ -1.76
GDF9O60383 MIR5195-201ENST00000583555 115 ntBASIC4.08□□□□□ -1.76
GDF9O60383 MIR4777-201ENST00000583710 86 ntBASIC4.08□□□□□ -1.76
GDF9O60383 AC005000.2-201ENST00000605468 310 ntBASIC4.08□□□□□ -1.76
GDF9O60383 YPEL5P2-201ENST00000605553 359 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms