Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RPS29P2-201ENST00000479278 136 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 AP004217.1-201ENST00000480579 346 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 RNU6-586P-201ENST00000517265 104 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 AC011921.3-201ENST00000605540 361 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.61□□□□□ -1.83
SMARCA5O60264 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 U4atac.1-201ENST00000618345 95 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMARCA5O60264 AL035425.3-201ENST00000564206 4996 ntBASIC3.61□□□□□ -1.83
SMARCA5O60264 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SMARCA5O60264 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCA5O60264 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.6□□□□□ -1.83
SMARCA5O60264 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SMARCA5O60264 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCA5O60264 MAPK10-266ENST00000641066 6555 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 Y_RNA.44-201ENST00000362676 108 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 RNU6-879P-201ENST00000364328 108 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 RNU6-740P-201ENST00000364734 105 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 DYNLT3P1-201ENST00000378574 347 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 SNORD63-201ENST00000384262 68 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 AL031121.1-201ENST00000406553 254 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 RN7SKP51-201ENST00000410781 304 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 AC019205.3-201ENST00000424573 156 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 GPM6BP3-201ENST00000442797 145 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 AL353705.4-201ENST00000449661 238 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 SNORA25.14-201ENST00000516481 132 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 SNORA70.24-201ENST00000517233 118 ntBASIC3.6□□□□□ -1.83
SMARCA5O60264 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCA5O60264 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCA5O60264 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SMARCA5O60264 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCA5O60264 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCA5O60264 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCA5O60264 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCA5O60264 RNY4P28-201ENST00000365281 93 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 SNORA9-201ENST00000384215 133 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 Y_RNA.504-201ENST00000384481 104 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 MIR181B1-201ENST00000385240 110 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 SNORA48.5-201ENST00000391143 135 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCA5O60264 MIR548I2-201ENST00000408348 149 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 RPS29P6-201ENST00000438196 145 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCA5O60264 RPL26P26-201ENST00000480251 434 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCA5O60264 SNORA48.11-201ENST00000517015 89 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 SNORA43.4-201ENST00000629559 138 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 AC021753.1-201ENST00000635724 168 ntBASIC3.59□□□□□ -1.83
SMARCA5O60264 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCA5O60264 AC008264.2-201ENST00000610193 3731 ntBASIC3.59□□□□□ -1.84
SMARCA5O60264 Y_RNA.122-201ENST00000363331 96 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 RNU6-1286P-201ENST00000383871 107 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 MIR181A2-201ENST00000384863 110 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 MIR491-201ENST00000384877 84 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 RNU1-139P-201ENST00000391307 165 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 SNORD12B-201ENST00000410433 91 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 AL606753.1-201ENST00000427435 87 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 AC087477.1-201ENST00000465747 340 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCA5O60264 AL355297.2-201ENST00000604792 129 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 AL590240.4-201ENST00000616908 390 ntBASIC3.58□□□□□ -1.84
SMARCA5O60264 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCA5O60264 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCA5O60264 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCA5O60264 Y_RNA.170-201ENST00000363746 110 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 SNORA38-201ENST00000363946 132 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 Y_RNA.292-201ENST00000364904 97 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 SNORA18.3-201ENST00000384122 132 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 SNORA29-201ENST00000384183 140 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 RNU6-378P-201ENST00000384324 107 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 AC022018.1-201ENST00000430685 241 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 AC090525.1-201ENST00000479116 478 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 SCGB1D5P-201ENST00000515134 247 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCA5O60264 AC027288.2-201ENST00000553028 243 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 AC074050.1-201ENST00000563247 211 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCA5O60264 MIR3923-201ENST00000579521 83 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 MIR4325-201ENST00000583049 90 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCA5O60264 RMST_6.1-201ENST00000611980 203 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 AC069528.2-201ENST00000624849 1991 ntBASIC3.57□□□□□ -1.84
SMARCA5O60264 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCA5O60264 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMARCA5O60264 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCA5O60264 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCA5O60264 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCA5O60264 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCA5O60264 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCA5O60264 SNORD115-32-201ENST00000364079 82 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 RNU6-326P-201ENST00000365480 107 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 RNU1-109P-201ENST00000383960 147 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 Y_RNA.446-201ENST00000384178 104 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 U8.10-201ENST00000384260 133 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 SNORA44-201ENST00000384584 132 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 MIR561-201ENST00000385216 97 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 UBA52P6-201ENST00000399822 382 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 AL033519.2-201ENST00000403958 392 ntBASIC3.56□□□□□ -1.84
SMARCA5O60264 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.56□□□□□ -1.84
SMARCA5O60264 WARS2P1-201ENST00000429678 537 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms