Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CYCSP23-201ENST00000519781 313 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AC034114.1-201ENST00000520293 285 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AC022080.3-201ENST00000544433 482 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 RRN3P3-201ENST00000549207 578 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AC008269.2-201ENST00000561915 1105 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR4659A-201ENST00000580269 81 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AL121655.1-201ENST00000605811 308 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PHGDHO43175 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PHGDHO43175 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.69□□□□□ -1.98
PHGDHO43175 RNU6-438P-201ENST00000365561 103 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 Y_RNA.380-201ENST00000365663 111 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 Y_RNA.415-201ENST00000384012 112 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 Y_RNA.551-201ENST00000384661 102 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 RNU2-48P-201ENST00000410694 191 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.69□□□□□ -1.98
PHGDHO43175 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.69□□□□□ -1.98
PHGDHO43175 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.69□□□□□ -1.98
PHGDHO43175 AL117187.1-201ENST00000555482 181 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.69□□□□□ -1.98
PHGDHO43175 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
PHGDHO43175 AL357075.2-201ENST00000614906 189 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 AC011476.5-201ENST00000615594 130 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 AC240442.1-201ENST00000616055 283 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 AC080100.1-201ENST00000624239 5356 ntBASIC2.69□□□□□ -1.98
PHGDHO43175 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.69□□□□□ -1.98
PHGDHO43175 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PHGDHO43175 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PHGDHO43175 RNU6-545P-201ENST00000362681 104 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 Y_RNA.210-201ENST00000364161 110 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 RNU6-1305P-201ENST00000364353 104 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 SNORD87-201ENST00000364849 89 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 RNU6-611P-201ENST00000384276 104 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 RPEP5-201ENST00000441137 268 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 SNORA40.9-201ENST00000515895 93 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 RNU6-991P-201ENST00000516168 107 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 RNU6-397P-201ENST00000516226 104 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 AC131281.1-201ENST00000522984 164 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 AL021879.1-201ENST00000611756 288 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PHGDHO43175 AC068205.3-201ENST00000636385 468 ntBASIC2.68□□□□□ -1.98
PHGDHO43175 RNU6-238P-201ENST00000363313 106 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 RNU1-112P-201ENST00000364401 164 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 SNORD31B-201ENST00000364977 69 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 Y_RNA.458-201ENST00000384240 102 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 RNU6-574P-201ENST00000384265 107 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 Y_RNA.512-201ENST00000384518 102 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 MIR300-201ENST00000401138 83 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 MIR1283-1-201ENST00000408494 87 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 RNU6-130P-201ENST00000411112 103 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 HMGN2P18-201ENST00000450680 270 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 S100A11P2-201ENST00000467589 312 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 MIR3200-201ENST00000580767 85 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 MIR4658-201ENST00000584344 65 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 AL355297.3-201ENST00000604082 446 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 RAC1P9-201ENST00000604990 392 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 Y_RNA.772-201ENST00000606692 102 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 AC093732.2-201ENST00000607950 274 ntBASIC2.67□□□□□ -1.98
PHGDHO43175 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PHGDHO43175 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.67□□□□□ -1.98
PHGDHO43175 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.66□□□□□ -1.98
PHGDHO43175 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PHGDHO43175 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.66□□□□□ -1.98
PHGDHO43175 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.66□□□□□ -1.98
PHGDHO43175 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PHGDHO43175 Y_RNA.26-201ENST00000362539 101 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 Y_RNA.152-201ENST00000363578 100 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 Y_RNA.214-201ENST00000364201 112 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 SNORA44-201ENST00000384584 132 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 MRPL35P1-201ENST00000404272 572 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 RNA5SP504-201ENST00000410676 117 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 ELOCP20-201ENST00000422460 345 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
PHGDHO43175 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.66□□□□□ -1.98
PHGDHO43175 MRPS35P2-201ENST00000508242 191 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 AC067942.3-201ENST00000512025 362 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 RNU6-408P-201ENST00000515910 100 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 SNORA4.4-201ENST00000515921 135 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 RNU6-107P-201ENST00000516643 102 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 RNU6-635P-201ENST00000516651 102 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 MIR4753-201ENST00000585119 83 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 AC005000.2-201ENST00000605468 310 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 AC025754.2-201ENST00000606491 432 ntBASIC2.66□□□□□ -1.98
PHGDHO43175 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PHGDHO43175 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PHGDHO43175 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.66□□□□□ -1.98
PHGDHO43175 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PHGDHO43175 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PHGDHO43175 RNU6-525P-201ENST00000363685 104 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms