Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXN1O15353 RPS15AP7-201ENST00000439294 405 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXN1O15353 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RNY3P16-201ENST00000516338 101 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 Y_RNA.679-201ENST00000516416 91 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RNA5SP165-201ENST00000517142 115 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RPL23AP88-201ENST00000605759 454 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 SCARNA4-201ENST00000629045 128 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXN1O15353 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXN1O15353 RNA5SP361-201ENST00000362686 118 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 RNU6-923P-201ENST00000364753 107 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 Y_RNA.398-201ENST00000383952 99 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 RNU6-968P-201ENST00000384076 107 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FOXN1O15353 RNA5SP213-201ENST00000391031 106 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 SNORD12B-201ENST00000410433 91 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 YPEL5P1-201ENST00000419731 367 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AL356320.1-201ENST00000429616 163 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXN1O15353 AL078601.1-201ENST00000444542 271 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AC011753.1-201ENST00000451001 220 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN1O15353 RPL23AP62-201ENST00000463396 453 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AP000870.1-201ENST00000472927 406 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 RPL30P1-201ENST00000488676 339 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 RNU1-61P-201ENST00000516107 151 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AP001485.1-201ENST00000604799 199 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AC037487.3-201ENST00000606668 112 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 AC090132.2-201ENST00000615881 347 ntBASIC3.15□□□□□ -1.91
FOXN1O15353 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXN1O15353 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXN1O15353 Y_RNA.304-201ENST00000365011 112 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 RNU5A-5P-201ENST00000411054 116 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 RPL19P1-201ENST00000411635 428 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.14□□□□□ -1.91
FOXN1O15353 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXN1O15353 RNU7-110P-201ENST00000516891 62 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXN1O15353 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXN1O15353 MIR4782-201ENST00000577987 79 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
FOXN1O15353 U6.98-201ENST00000637157 84 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXN1O15353 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXN1O15353 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXN1O15353 AC008568.2-201ENST00000623862 2313 ntBASIC3.14□□□□□ -1.91
FOXN1O15353 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXN1O15353 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXN1O15353 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXN1O15353 SNORA25.1-201ENST00000362326 128 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.82-201ENST00000363000 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.92-201ENST00000363043 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 RNU6-105P-201ENST00000363909 104 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.235-201ENST00000364412 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.306-201ENST00000365015 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.312-201ENST00000365089 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.322-201ENST00000365151 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.446-201ENST00000384178 104 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 RNU6-21P-201ENST00000384710 107 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 RNU6-1135P-201ENST00000411083 103 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXN1O15353 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.650-201ENST00000459002 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 AP001324.2-201ENST00000461163 319 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 AC073901.1-201ENST00000462471 408 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 AP001025.1-201ENST00000486139 332 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 RNU6-1219P-201ENST00000516143 112 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.777-201ENST00000516982 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 AC027288.2-201ENST00000553028 243 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 MIR1273D-201ENST00000577266 86 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 MIR4423-201ENST00000580922 80 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 AC008749.1-201ENST00000597650 306 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.771-201ENST00000598668 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 RMST_6.1-201ENST00000611980 203 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 Y_RNA.789-201ENST00000622480 102 ntBASIC3.13□□□□□ -1.91
FOXN1O15353 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXN1O15353 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXN1O15353 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXN1O15353 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXN1O15353 RNU6-626P-201ENST00000363354 107 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 SNORD50B-201ENST00000364995 70 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 RNU6-1289P-201ENST00000384431 106 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 RNU6-1035P-201ENST00000384477 107 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
FOXN1O15353 RNU1-139P-201ENST00000391307 165 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXN1O15353 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 AL356867.1-201ENST00000429623 299 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXN1O15353 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXN1O15353 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXN1O15353 AL031659.1-201ENST00000447075 539 ntBASIC3.12□□□□□ -1.91
FOXN1O15353 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXN1O15353 SSXP4-201ENST00000451349 245 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms