Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNRPGP7-201ENST00000469016 106 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU11-2P-201ENST00000516898 142 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 MIR5708-201ENST00000579723 85 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 AL117336.2-201ENST00000602435 335 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 DEFB131E-202ENST00000602581 683 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 AL158042.1-201ENST00000605338 460 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 AC091925.1-201ENST00000623204 462 ntBASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.58□□□□□ -2.5
CHKB-CPT1BH3BT56 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-833P-201ENST00000363486 107 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-511P-201ENST00000363496 107 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 snoZ40.1-201ENST00000364540 72 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 SNORD32A-201ENST00000364805 84 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 RPL17P50-201ENST00000396131 546 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AL360271.2-201ENST00000447710 161 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 MTCO1P27-201ENST00000448269 226 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AC026616.1-201ENST00000523157 525 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AC016957.1-201ENST00000534895 309 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AL357075.2-201ENST00000614906 189 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 AL359697.1-201ENST00000624879 587 ntBASIC-0.59□□□□□ -2.5
CHKB-CPT1BH3BT56 SNORA18.1-201ENST00000363418 128 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-960P-201ENST00000364056 120 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-692P-201ENST00000384496 107 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR526A1-201ENST00000384897 85 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 RPL23AP30-201ENST00000432419 501 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 HMGN2P26-201ENST00000463169 339 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 AC016632.1-201ENST00000503994 196 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 RNA5SP436-201ENST00000516020 115 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR6755-201ENST00000619993 66 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 AL356596.1-201ENST00000624230 379 ntBASIC-0.6□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-552P-201ENST00000362869 119 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 U3.4-201ENST00000363352 213 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-650P-201ENST00000365658 111 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 AL133396.1-201ENST00000432048 687 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 SNORA26.10-201ENST00000516427 141 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-567P-201ENST00000516746 107 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 AL359547.2-201ENST00000615810 418 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR8070-201ENST00000616510 88 ntBASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.61□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR330-201ENST00000362196 94 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-654P-201ENST00000364373 107 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR892B-201ENST00000401279 77 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-293P-201ENST00000411259 106 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-56P-201ENST00000458744 62 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-94P-201ENST00000459576 63 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-12P-201ENST00000516030 62 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU2-46P-201ENST00000517038 113 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 DEFB130C-202ENST00000530001 230 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 AL512347.1-201ENST00000566420 503 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR5697-201ENST00000578045 78 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR4769-201ENST00000584126 77 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 AC006157.1-201ENST00000611750 366 ntBASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.62□□□□□ -2.51
CHKB-CPT1BH3BT56 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-925P-201ENST00000384629 104 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR208B-201ENST00000401172 77 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 ELOCP17-201ENST00000414751 326 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 HSFY5P-201ENST00000453726 309 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-159P-201ENST00000459284 62 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 uc_338.6-201ENST00000613544 171 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 AC067863.3-201ENST00000624172 122 ntBASIC-0.63□□□□□ -2.51
CHKB-CPT1BH3BT56 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 SNORD14C-201ENST00000365382 88 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 SNORA2B-201ENST00000384583 137 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR193B-201ENST00000384907 83 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU6-269P-201ENST00000391077 97 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AL353997.1-201ENST00000432936 108 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 USP9YP29-201ENST00000445112 563 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AL392103.1-201ENST00000447000 198 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC013470.1-201ENST00000453438 462 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 snoU13.21-201ENST00000459368 105 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms