Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC016957.1-201ENST00000534895 309 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 TPRKBP2-201ENST00000565969 475 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 SNORD53B-201ENST00000577887 78 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC146944.4-201ENST00000602697 718 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AL929325.1-201ENST00000603096 117 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC021506.2-201ENST00000612354 169 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 MIR6845-201ENST00000613182 61 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 AC099654.5-201ENST00000636479 350 ntBASIC0.98□□□□□ -2.25
SMKR1H3BMG3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SMKR1H3BMG3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 U8.2-201ENST00000363156 134 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RNU6-1085P-201ENST00000363576 107 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 SNORD113-7-201ENST00000363762 77 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RNU4-13P-201ENST00000364019 141 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RNU6-1042P-201ENST00000384204 107 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RNU6-1119P-201ENST00000384349 108 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 Y_RNA.510-201ENST00000384511 114 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 MIR487A-201ENST00000385009 80 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RNU4-26P-201ENST00000410270 107 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RPL37P10-201ENST00000412884 288 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 TOMM22P2-201ENST00000430735 237 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RPS27P1-201ENST00000450552 247 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RPL31P58-201ENST00000469001 379 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AL133373.1-201ENST00000497098 94 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RNU1-117P-201ENST00000517041 158 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 MTND1P5-201ENST00000517906 940 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AC090821.2-201ENST00000523552 176 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AP003033.1-201ENST00000527244 415 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 MTND3P12-201ENST00000559068 328 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AL158211.1-201ENST00000566763 763 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 RN7SKP299-201ENST00000606679 301 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AL050343.2-201ENST00000607338 280 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 SNORD11B-201ENST00000607707 90 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AL359075.3-201ENST00000613288 217 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 AC097520.1-201ENST00000624435 385 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.97□□□□□ -2.25
SMKR1H3BMG3 MIR6863-201ENST00000636112 90 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 U6.108-201ENST00000637764 58 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.97□□□□□ -2.25
SMKR1H3BMG3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 U8.1-201ENST00000362843 134 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 Y_RNA.231-201ENST00000364358 102 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 RNU6-522P-201ENST00000364497 107 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 RNU6-128P-201ENST00000383976 107 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 MTND1P26-201ENST00000440488 538 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 AL353572.1-201ENST00000442490 417 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 AL606517.2-201ENST00000442855 241 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 SUMO2P16-201ENST00000519475 264 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 AC091544.4-201ENST00000555268 342 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.96□□□□□ -2.26
SMKR1H3BMG3 MIR4435-1-201ENST00000582552 80 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 RNU6-89P-201ENST00000606519 100 ntBASIC0.96□□□□□ -2.26
SMKR1H3BMG3 SNORD50.1-201ENST00000362987 71 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 RNU6-254P-201ENST00000363377 107 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 SNORD115-8-201ENST00000363856 82 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 SNORD115-38-201ENST00000365037 82 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AL590002.1-201ENST00000406554 418 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 RN7SKP200-201ENST00000410564 320 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 RNA5SP504-201ENST00000410676 117 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AC010154.1-201ENST00000425857 269 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AC015922.2-201ENST00000435593 184 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 PGBD4P5-201ENST00000445958 426 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AC083904.1-201ENST00000487828 231 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 RPS29P21-201ENST00000496272 170 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AC103851.1-201ENST00000506833 274 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 SNORA31.10-201ENST00000516482 106 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AL158209.2-201ENST00000619266 216 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 MIR7843-201ENST00000622274 79 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 MTND5P26-201ENST00000426018 1752 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 ZNF72P-201ENST00000425869 1908 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 AC091812.1-201ENST00000432235 1948 ntBASIC0.95□□□□□ -2.26
SMKR1H3BMG3 RNU6-60P-201ENST00000364792 103 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 RNU4-9P-201ENST00000364951 139 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 U8.13-201ENST00000390842 128 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 CALM2P3-201ENST00000400429 449 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AL356776.1-201ENST00000406574 447 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms