Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU2-52P-201ENST00000410680 190 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 RNU6-1203P-201ENST00000410703 110 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 AC005002.2-201ENST00000438228 269 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 SNORD109B-201ENST00000458961 67 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 SNORD109A-201ENST00000459128 67 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 MIR3162-201ENST00000581818 82 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 MZT1P2-201ENST00000604387 248 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 AL357075.2-201ENST00000614906 189 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 AC005562.2-201ENST00000618264 111 ntBASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PTPDC1A2A3K4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 RNU1-112P-201ENST00000364401 164 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AL138827.1-201ENST00000402666 306 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 RNU5A-5P-201ENST00000411054 116 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AC063976.3-201ENST00000426849 329 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AL109933.2-201ENST00000452651 260 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AC073901.1-201ENST00000462471 408 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AC091179.3-201ENST00000474761 144 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 RN7SL297P-201ENST00000483161 293 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AC074133.1-201ENST00000515696 183 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AK6P2-201ENST00000549020 471 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 AC233702.2-202ENST00000562547 291 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
PTPDC1A2A3K4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 MIR449A-201ENST00000362113 91 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 SNORD81.1-201ENST00000363064 77 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 RNU6-626P-201ENST00000363354 107 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 SNORD113-8-201ENST00000363497 74 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 RNU6-961P-201ENST00000363893 105 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 SNORA68.1-201ENST00000364537 132 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.350-201ENST00000365409 98 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.447-201ENST00000384184 113 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 RNU2-38P-201ENST00000410856 79 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 AC027124.2-201ENST00000428249 105 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 AC140059.1-201ENST00000489238 361 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 HSPE1P18-201ENST00000517602 280 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 MIR4423-201ENST00000580922 80 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPDC1A2A3K4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.14-201ENST00000362415 103 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.230-201ENST00000364348 109 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.489-201ENST00000384410 101 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 MIR196B-201ENST00000384852 84 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 RNA5SP344-201ENST00000411081 104 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 AC108059.2-201ENST00000434626 151 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 AC004386.2-201ENST00000441858 148 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 IFNA11P-201ENST00000446352 526 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 UQCRBP2-201ENST00000447827 297 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 RRN3P3-201ENST00000549207 578 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 AP001282.2-201ENST00000616149 309 ntBASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
PTPDC1A2A3K4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 SNORA18.2-201ENST00000383865 132 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 RNU6-20P-201ENST00000384106 107 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.562-201ENST00000384695 113 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 SNORA12-201ENST00000391162 147 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 U6atac.2-201ENST00000408644 118 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 Y_RNA.602-201ENST00000410535 92 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 RPL30P4-201ENST00000429309 333 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 RPL39P38-201ENST00000467018 153 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 RPS23P5-201ENST00000495419 428 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 RNU6-496P-201ENST00000516145 99 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 RNU6-344P-201ENST00000516635 111 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 SCARNA3-201ENST00000517097 143 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 AC018448.1-201ENST00000552843 316 ntBASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPDC1A2A3K4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms