Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC006463.2-201ENST00000473326 348 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 AC027419.1-201ENST00000522976 328 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 AP003730.1-201ENST00000524605 285 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 U7.8-201ENST00000619968 63 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA11Q9Y5H2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 MAPK10-373ENST00000641983 6772 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 SNORA25.7-201ENST00000364375 127 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-438P-201ENST00000365561 103 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 AL159169.1-201ENST00000421119 127 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 RAC1P5-201ENST00000512182 576 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 AC026726.1-201ENST00000512859 601 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 RNU6-586P-201ENST00000517265 104 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR3138-201ENST00000585238 82 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 MIR7151-201ENST00000617477 60 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 Z82209.1-201ENST00000422141 2135 ntBASIC3.91□□□□□ -1.78
PCDHGA11Q9Y5H2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA11Q9Y5H2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA11Q9Y5H2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA11Q9Y5H2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.9□□□□□ -1.78
PCDHGA11Q9Y5H2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.9□□□□□ -1.78
PCDHGA11Q9Y5H2 Y_RNA.432-201ENST00000384087 111 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1274P-201ENST00000384557 107 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 TBCAP1-201ENST00000436520 327 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 AC016717.1-201ENST00000448918 286 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 HMGN2P7-201ENST00000456186 273 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1299P-201ENST00000516316 100 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-197P-201ENST00000516680 100 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 RNA5SP143-201ENST00000516936 115 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 AC107934.2-201ENST00000518653 310 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR4700-201ENST00000578311 74 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR2681-201ENST00000581814 105 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR486-1-201ENST00000612171 68 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 AP003122.5-201ENST00000527668 3766 ntBASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHGA11Q9Y5H2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1064P-201ENST00000410626 104 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 TPT1P12-201ENST00000448968 492 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-498P-201ENST00000459468 107 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AC008155.2-201ENST00000464337 397 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AC093663.1-201ENST00000497190 394 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-711P-201ENST00000517255 106 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AC025647.1-201ENST00000517879 253 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AL160236.1-201ENST00000556317 195 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 MIR4474-201ENST00000579189 78 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 AC120024.3-201ENST00000603167 156 ntBASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PCDHGA11Q9Y5H2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-944P-201ENST00000364023 107 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1082P-201ENST00000364574 107 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 SNORA72-201ENST00000384339 132 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC009414.1-201ENST00000427200 443 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC010531.2-201ENST00000465012 153 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 ATP5EP1-201ENST00000510257 156 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 RNA5SP76-201ENST00000516277 87 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU2-34P-201ENST00000516534 121 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC093732.2-201ENST00000607950 274 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC012531.5-201ENST00000611375 151 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 AC096577.2-201ENST00000611455 153 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 UCA1.1-201ENST00000620952 75 ntBASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA11Q9Y5H2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 RNU6-153P-201ENST00000364422 104 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 SNORA14A-201ENST00000364773 135 ntBASIC3.87□□□□□ -1.79
PCDHGA11Q9Y5H2 RNA5SP511-201ENST00000410487 115 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms