Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNU6-832P-201ENST00000363319 107 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 SNORD31B-201ENST00000364977 69 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 RNU6-1189P-201ENST00000383958 107 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 BTF3P4-201ENST00000418852 495 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 RNU1-131P-201ENST00000458943 161 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 RNU2-11P-201ENST00000459191 187 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 RPL36AP48-201ENST00000485521 314 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 AC025445.1-201ENST00000502728 300 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 MIR4277-201ENST00000578298 84 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 MIR4715-201ENST00000584117 79 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 AL022401.1-201ENST00000619498 108 ntBASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA4Q9Y5G9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA4Q9Y5G9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA4Q9Y5G9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDHGA4Q9Y5G9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.65□□□□□ -1.66
PCDHGA4Q9Y5G9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA4Q9Y5G9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-219P-201ENST00000364728 107 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 SNORD115-35-201ENST00000365122 82 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-234P-201ENST00000365229 104 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-418P-201ENST00000384035 107 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.454-201ENST00000384224 113 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 RN7SKP156-201ENST00000410308 342 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 PARP4P3-201ENST00000510265 317 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 AL110118.1-201ENST00000553543 400 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 SNORA74C-1-201ENST00000580726 201 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 AC010733.2-201ENST00000589496 5702 ntBASIC4.65□□□□□ -1.67
PCDHGA4Q9Y5G9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.190-201ENST00000363964 101 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR577-201ENST00000385196 96 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 AC114755.2-201ENST00000413520 361 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 RN7SL558P-201ENST00000497468 299 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR4644-201ENST00000579929 84 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 AL121932.1-201ENST00000605542 214 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR6853-201ENST00000619642 74 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 AC092435.4-201ENST00000623012 4159 ntBASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA4Q9Y5G9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.155-201ENST00000363632 101 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 RNA5SP479-201ENST00000364858 117 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 U3.30-201ENST00000391308 210 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 AL133162.1-201ENST00000463228 453 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-709P-201ENST00000517257 104 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR3683-201ENST00000580847 82 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 AC087685.1-201ENST00000587507 141 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR7154-201ENST00000620673 73 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR6830-201ENST00000636015 70 ntBASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA4Q9Y5G9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 MAPK10-372ENST00000641954 3413 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 FAM35DP-201ENST00000323387 2712 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.253-201ENST00000364562 112 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-60P-201ENST00000364792 103 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 Y_RNA.360-201ENST00000365512 102 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 SNORA18-201ENST00000384416 132 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR548Z-201ENST00000584743 97 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 AC022726.1-201ENST00000587475 207 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 AC022217.4-201ENST00000604389 163 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 AL359075.3-201ENST00000613288 217 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 MIR4727-201ENST00000622232 55 ntBASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA4Q9Y5G9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 SNORA70F-201ENST00000384142 135 ntBASIC4.61□□□□□ -1.67
PCDHGA4Q9Y5G9 RNU6-733P-201ENST00000410759 104 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms