Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC114982.1-201ENST00000469402 321 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC091179.3-201ENST00000474761 144 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC010469.2-201ENST00000496412 480 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC131281.1-201ENST00000522984 164 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC090616.3-201ENST00000582184 217 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 uc_338.25-201ENST00000613756 156 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC093831.2-201ENST00000624393 3427 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.149-201ENST00000363558 117 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.153-201ENST00000363615 91 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 AL356057.3-201ENST00000402607 340 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 RNA5SP492-201ENST00000411330 114 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 AL390729.2-201ENST00000416137 156 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 AL358176.2-201ENST00000425769 204 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 AC244505.4-201ENST00000434905 287 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 SSXP5-201ENST00000443473 287 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU7-14P-201ENST00000459331 62 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 RN7SL75P-201ENST00000461926 281 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORA40.9-201ENST00000515895 93 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 AC023043.3-201ENST00000593113 385 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 MZT1P2-201ENST00000604387 248 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.89□□□□□ -1.95
PCDHGA9Q9Y5G4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORD31B-201ENST00000364977 69 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR586-201ENST00000385035 97 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR549A-201ENST00000385268 96 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 RPL32P35-201ENST00000415214 394 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 CST9LP2-201ENST00000437612 320 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 MRPS35P2-201ENST00000508242 191 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 RRN3P3-201ENST00000549207 578 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR3162-201ENST00000581818 82 ntBASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA9Q9Y5G4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-438P-201ENST00000365561 103 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-1105P-201ENST00000384774 107 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR1302-3-201ENST00000408128 138 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC009238.1-201ENST00000442165 424 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC009237.6-201ENST00000446969 424 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 DEFB131C-201ENST00000528817 165 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR4753-201ENST00000585119 83 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 ELOCP29-201ENST00000588193 334 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC008873.1-201ENST00000625051 138 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 AC009487.4-201ENST00000624969 3585 ntBASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PCDHGA9Q9Y5G4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 AC135776.4-201ENST00000624300 1904 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.210-201ENST00000364161 110 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-1109P-201ENST00000391187 107 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR548F4-201ENST00000408515 105 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RPL19P1-201ENST00000411635 428 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 MTND3P2-201ENST00000438452 342 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RN7SL429P-201ENST00000479090 223 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RN7SL489P-201ENST00000486185 223 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RN7SL327P-201ENST00000488659 223 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 AC018448.1-201ENST00000552843 316 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 AC008269.2-201ENST00000561915 1105 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 RN7SL853P-201ENST00000617250 223 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms