Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-834P-201ENST00000362367 110 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-643P-201ENST00000384018 107 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-198P-201ENST00000384258 104 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 RNU1-57P-201ENST00000384491 166 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 MIR1251-201ENST00000408552 70 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AL139281.1-201ENST00000422120 335 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AL133162.1-201ENST00000463228 453 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 SNRPGP3-201ENST00000469405 227 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AC006064.5-201ENST00000541782 248 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AC006023.1-201ENST00000603944 259 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AC025754.2-201ENST00000606491 432 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 MIR6868-201ENST00000611215 58 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AC012640.5-201ENST00000623897 319 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 AL136164.4-201ENST00000625013 2135 ntBASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HCN4Q9Y3Q4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 Y_RNA.229-201ENST00000364347 113 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-44P-201ENST00000384045 107 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 RPS26P15-201ENST00000488067 348 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 RNU6-1234P-201ENST00000516877 103 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 MIR4724-201ENST00000579485 89 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 AC020914.4-201ENST00000597690 277 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 RPL12P50-201ENST00000603116 116 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 AP001340.1-201ENST00000624405 217 ntBASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HCN4Q9Y3Q4 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 MIR586-201ENST00000385035 97 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 MIR15B-201ENST00000385045 98 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 MT-TT-201ENST00000387460 66 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 AL606845.1-201ENST00000404881 255 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 AP000567.1-201ENST00000406413 156 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 SNORA3C-201ENST00000408792 125 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 RPL23AP62-201ENST00000463396 453 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 RNU4-57P-201ENST00000515980 135 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 MIR2114-201ENST00000516645 80 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 HSPE1P18-201ENST00000517602 280 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 AC079598.5-201ENST00000547460 117 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 LINC02471-203ENST00000641941 4752 ntBASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCN4Q9Y3Q4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.03□□□□□ -1.77
HCN4Q9Y3Q4 AL513302.2-201ENST00000562313 1842 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 RNU6-728P-201ENST00000365375 104 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 MIR490-201ENST00000384865 128 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 SNORD37.2-201ENST00000391075 66 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 MIR1261-201ENST00000408659 82 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 AC005326.1-201ENST00000429197 123 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 RN7SL585P-201ENST00000470538 280 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 RPL29P14-201ENST00000495837 428 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 Y_RNA.686-201ENST00000516548 134 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 AP000867.2-201ENST00000532468 320 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 MIR4276-201ENST00000584832 70 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCN4Q9Y3Q4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 AC093010.3-201ENST00000570269 15214 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 RNU6-1325P-201ENST00000364905 105 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 RNU6-407P-201ENST00000365280 104 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 RNY3P5-201ENST00000384127 102 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 Y_RNA.563-201ENST00000384707 108 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 SNORD66.1-201ENST00000391230 76 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 MIR1185-2-201ENST00000408687 86 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 MIR1179-201ENST00000408703 91 ntBASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HCN4Q9Y3Q4 TBCAP1-201ENST00000436520 327 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms