Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RPS20P10-201ENST00000451209 253 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RNU7-57P-201ENST00000459540 60 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 AC090515.1-201ENST00000465295 476 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RPS29P2-201ENST00000479278 136 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-586P-201ENST00000517265 104 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 MIR5685-201ENST00000579080 79 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 MIR3199-1-201ENST00000582434 88 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 MIR4753-201ENST00000585119 83 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC093908.1-201ENST00000623125 8092 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 MIR300-201ENST00000401138 83 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 RN7SKP202-201ENST00000410439 330 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC016717.1-201ENST00000448918 286 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC026402.1-201ENST00000513642 170 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 SCARNA14-201ENST00000516903 136 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC109329.2-201ENST00000519658 482 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC021269.2-201ENST00000532318 330 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC106785.1-201ENST00000565935 262 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC025754.2-201ENST00000606491 432 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SF3B6Q9Y3B4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-1130P-201ENST00000365434 107 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.456-201ENST00000384232 111 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 SNORA48.5-201ENST00000391143 135 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-381P-201ENST00000391259 108 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 AL355796.1-201ENST00000406706 323 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RPS29P7-201ENST00000439662 171 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RN7SL323P-201ENST00000494712 295 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 SNORA70.12-201ENST00000516084 153 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-965P-201ENST00000516721 96 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 AC004832.4-201ENST00000608952 331 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 AC108706.1-201ENST00000611053 297 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 PWAR6-201ENST00000552334 4618 ntBASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B6Q9Y3B4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-899P-201ENST00000363947 107 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.272-201ENST00000364696 102 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 SNORD116-18-201ENST00000383961 92 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 DBIP2-201ENST00000419076 262 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 SEPT7P4-201ENST00000437076 306 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 RNU7-141P-201ENST00000459304 62 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 RPS27AP9-201ENST00000477681 438 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AC132825.6-201ENST00000638861 357 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AP000553.6-201ENST00000641242 118 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 AC091152.2-201ENST00000591628 2569 ntBASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SF3B6Q9Y3B4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 SNORA20B-201ENST00000384220 132 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 MIR30B-201ENST00000384850 88 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-57P-201ENST00000411348 103 ntBASIC3.16□□□□□ -1.9
SF3B6Q9Y3B4 AC093578.1-201ENST00000415219 368 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms