Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC000403.1-201ENST00000613696 3585 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 Y_RNA.7-201ENST00000362352 102 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 RNU6-655P-201ENST00000362858 107 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 Y_RNA.580-201ENST00000391004 95 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 RNA5SP252-201ENST00000391131 119 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 AC025281.1-201ENST00000567026 265 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 MIR5006-201ENST00000583027 110 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 AP001485.1-201ENST00000604799 199 ntBASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHA4Q9UN74 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 Y_RNA.238-201ENST00000364441 102 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 Y_RNA.272-201ENST00000364696 102 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 SNORA18.2-201ENST00000383865 132 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 RNU1-57P-201ENST00000384491 166 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 RNU6-763P-201ENST00000390865 106 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 AL353705.1-201ENST00000433468 480 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 MIR5680-201ENST00000577577 84 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 uc_338.25-201ENST00000613756 156 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 AL078604.3-201ENST00000615580 211 ntBASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHA4Q9UN74 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 SNORD115-30-201ENST00000364117 82 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RNU4-17P-201ENST00000365598 141 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RNU6-81P-201ENST00000365608 104 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RN7SL442P-201ENST00000473804 320 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RNU2-44P-201ENST00000516795 194 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 SNORA31.21-201ENST00000517180 77 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 MIR3944-201ENST00000581277 108 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHA4Q9UN74 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDHA4Q9UN74 AC069528.2-201ENST00000624849 1991 ntBASIC3.65□□□□□ -1.82
PCDHA4Q9UN74 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PCDHA4Q9UN74 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDHA4Q9UN74 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
PCDHA4Q9UN74 Y_RNA.121-201ENST00000363309 113 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU6-801P-201ENST00000364087 105 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU6-312P-201ENST00000364629 107 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 SNORA67.2-201ENST00000384300 149 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AL031003.1-201ENST00000404229 172 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AP000567.1-201ENST00000406413 156 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU2-2P-201ENST00000410396 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU4-47P-201ENST00000410876 114 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 BMS1P22-201ENST00000414726 313 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AL365496.1-201ENST00000426885 215 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U8.19-201ENST00000459095 133 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AC112771.1-201ENST00000463581 102 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RN7SL807P-201ENST00000470923 297 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU1-117P-201ENST00000517041 158 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AC136628.3-201ENST00000521868 290 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AC079598.5-201ENST00000547460 117 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU2-4P-201ENST00000606190 192 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.15-201ENST00000611544 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.16-201ENST00000613119 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.12-201ENST00000613778 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.9-201ENST00000615427 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.11-201ENST00000616345 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.2-201ENST00000616535 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.3-201ENST00000617785 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.19-201ENST00000618602 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 RNU2-1-201ENST00000618664 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.6-201ENST00000619225 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.5-201ENST00000619465 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 U2.10-201ENST00000620268 191 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AC006111.3-201ENST00000622137 383 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 MTND1P7-201ENST00000632801 297 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 AC026241.1-201ENST00000517873 2142 ntBASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHA4Q9UN74 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PCDHA4Q9UN74 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHA4Q9UN74 Y_RNA.75-201ENST00000362927 97 ntBASIC3.64□□□□□ -1.83
PCDHA4Q9UN74 Y_RNA.243-201ENST00000364481 109 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms