Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHB16Q9NRJ7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHB16Q9NRJ7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHB16Q9NRJ7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHB16Q9NRJ7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AL365361.1-201ENST00000566942 3481 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-490P-201ENST00000362985 107 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-873P-201ENST00000363833 107 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-890P-201ENST00000384121 107 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC063976.3-201ENST00000426849 329 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 EIF1P2-201ENST00000428233 350 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AL353997.1-201ENST00000432936 108 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC074290.1-201ENST00000448883 135 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 MTCO3P10-201ENST00000455912 772 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-948P-201ENST00000516374 107 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 RAB11AP2-201ENST00000545905 639 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 MIR4753-201ENST00000585119 83 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC126177.8-201ENST00000618339 1015 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC130454.1-201ENST00000622948 401 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC092608.2-201ENST00000624427 218 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC112487.2-201ENST00000637950 304 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 MTND5P10-201ENST00000603719 1809 ntBASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHB16Q9NRJ7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-545P-201ENST00000362681 104 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RNU4-73P-201ENST00000363164 141 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RNU1-112P-201ENST00000364401 164 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-793P-201ENST00000384233 104 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AC022028.1-201ENST00000412054 408 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 SNRPEP8-201ENST00000442866 260 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 RPL30P15-201ENST00000457129 321 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AC022493.2-201ENST00000506122 481 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 GTF3AP2-201ENST00000557014 266 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 Y_RNA.804-201ENST00000615262 101 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AC006386.2-201ENST00000624491 75 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AC012005.1-201ENST00000624575 75 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 MTND4LP32-201ENST00000636111 270 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AC068205.3-201ENST00000636385 468 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 MTND5P16-201ENST00000460269 1703 ntBASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB16Q9NRJ7 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RNA5SP456-201ENST00000364002 114 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RNA5SP493-201ENST00000364115 91 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 SNORD114-6-201ENST00000364393 72 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 MIR625-201ENST00000385047 85 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AL109933.2-201ENST00000452651 260 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-498P-201ENST00000459468 107 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 HMGN2P9-201ENST00000476875 229 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RN7SL636P-201ENST00000497504 294 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 RNU7-4P-201ENST00000516961 62 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 EIF4BP1-201ENST00000554881 351 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 MIR3169-201ENST00000578032 83 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 SNORD53-201ENST00000579969 78 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC007229.1-201ENST00000590455 412 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC010999.1-201ENST00000611856 324 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AC005296.1-201ENST00000616145 209 ntBASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHB16Q9NRJ7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PCDHB16Q9NRJ7 RNU6-874P-201ENST00000362390 105 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU4-79P-201ENST00000362764 141 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 U3.8-201ENST00000363675 217 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU6-99P-201ENST00000364721 107 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU5E-4P-201ENST00000364931 120 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU6-1040P-201ENST00000383974 107 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 MIR549A-201ENST00000385268 96 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 RNA5SP184-201ENST00000411071 108 ntBASIC2.15□□□□□ -2.07
PCDHB16Q9NRJ7 AF228730.4-201ENST00000421457 183 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms