Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SNORD87-201ENST00000364849 89 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SNORD116-14-201ENST00000383894 92 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SNORD116-17-201ENST00000383929 92 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 Y_RNA.420-201ENST00000384043 110 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 RNU6-80P-201ENST00000384195 107 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SNORD116-15-201ENST00000384445 92 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SNORD116-19-201ENST00000384729 92 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 RPS4XP13-201ENST00000483219 789 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 RN7SKP164-201ENST00000516138 266 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 RNU6-453P-201ENST00000516819 85 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 RNU1-117P-201ENST00000517041 158 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 ACA59.2-201ENST00000517061 156 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 CKS1BP7-201ENST00000522230 235 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.17□□□□□ -1.74
EFCC1Q9HA90 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EFCC1Q9HA90 AC068700.1-201ENST00000565862 3754 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 FAM35BP-202ENST00000497389 3337 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EFCC1Q9HA90 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
EFCC1Q9HA90 RNA5SP374-201ENST00000362939 125 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 RNU6-454P-201ENST00000364292 107 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 HSPE1P26-201ENST00000405341 275 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 RNU2-37P-201ENST00000410695 177 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.16□□□□□ -1.74
EFCC1Q9HA90 NDUFS5P4-201ENST00000412983 318 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 RPS26P42-201ENST00000413485 326 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AC245047.8-201ENST00000456455 284 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AC007215.1-201ENST00000464893 276 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 S100A11P2-201ENST00000467589 312 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 RPL31P41-201ENST00000477967 372 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 CYP4A27P-201ENST00000567218 190 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AC090897.2-201ENST00000581715 130 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 SNRPGP20-201ENST00000604477 205 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AC011603.4-201ENST00000611325 277 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 UBE3AP2-201ENST00000429033 2259 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
EFCC1Q9HA90 AC010329.5-201ENST00000623497 2174 ntBASIC4.16□□□□□ -1.74
EFCC1Q9HA90 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.74
EFCC1Q9HA90 AC093908.1-201ENST00000623125 8092 ntBASIC4.15□□□□□ -1.74
EFCC1Q9HA90 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
EFCC1Q9HA90 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
EFCC1Q9HA90 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EFCC1Q9HA90 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
EFCC1Q9HA90 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
EFCC1Q9HA90 RNU6-245P-201ENST00000384020 107 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 RNU2-52P-201ENST00000410680 190 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AL135790.2-201ENST00000437701 267 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.15□□□□□ -1.75
EFCC1Q9HA90 RN7SL504P-201ENST00000494496 287 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 RNU7-121P-201ENST00000516604 62 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 RNU2-12P-201ENST00000517216 168 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AC021739.1-201ENST00000559631 174 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AL162274.2-201ENST00000614406 332 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AC013791.1-201ENST00000616619 62 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 AC018692.3-201ENST00000623929 123 ntBASIC4.15□□□□□ -1.75
EFCC1Q9HA90 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
EFCC1Q9HA90 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.15□□□□□ -1.75
EFCC1Q9HA90 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.15□□□□□ -1.75
EFCC1Q9HA90 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
EFCC1Q9HA90 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EFCC1Q9HA90 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.14□□□□□ -1.75
EFCC1Q9HA90 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
EFCC1Q9HA90 AC058791.1-201ENST00000608412 3198 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 RNU6-153P-201ENST00000364422 104 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 RNU6-301P-201ENST00000384277 107 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 SNORA8.3-201ENST00000384679 139 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 SNORA26.3-201ENST00000391119 136 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 CBX3P9-201ENST00000402326 552 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 RNA5SP390-201ENST00000410191 113 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 RPS29P31-201ENST00000446147 164 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 HMGN2P10-201ENST00000448085 265 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 AL121914.1-201ENST00000450188 156 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 AC006539.3-201ENST00000454258 129 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 AC092185.1-201ENST00000491371 97 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 MIR5680-201ENST00000577577 84 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
EFCC1Q9HA90 AC006504.1-201ENST00000562493 3666 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 IPO8P1-201ENST00000455509 3109 ntBASIC4.14□□□□□ -1.75
EFCC1Q9HA90 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EFCC1Q9HA90 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
EFCC1Q9HA90 RNU1-62P-201ENST00000362599 164 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 RNU6-899P-201ENST00000363947 107 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 Y_RNA.287-201ENST00000364853 94 ntBASIC4.13□□□□□ -1.75
EFCC1Q9HA90 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
EFCC1Q9HA90 AC146507.2-201ENST00000460608 476 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms