Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RNU6-1059P-201ENST00000363752 98 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 Y_RNA.279-201ENST00000364763 95 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 Y_RNA.339-201ENST00000365325 102 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RNU6-842P-201ENST00000384269 107 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 MT-TL1-201ENST00000386347 75 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RNU6-174P-201ENST00000410406 106 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 AC004866.1-201ENST00000411748 78 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 AC123900.1-201ENST00000420390 96 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 USP9YP30-201ENST00000430729 455 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RBMX2P4-201ENST00000441256 376 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 SNORD5.1-201ENST00000458800 75 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RNU7-14P-201ENST00000459331 62 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 FO393415.2-201ENST00000480085 343 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 AP005660.1-201ENST00000522972 293 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 MIR4790-201ENST00000577799 79 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 MIR6128-201ENST00000615528 109 ntBASIC1.94□□□□□ -2.1
SNX25Q9H3E2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.94□□□□□ -2.1
SNX25Q9H3E2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNX25Q9H3E2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SNX25Q9H3E2 MTND5P9-201ENST00000503854 1755 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 CBX3P1-201ENST00000325243 554 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 SNORD31B-201ENST00000364977 69 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX25Q9H3E2 AL591806.2-201ENST00000433122 173 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 SNRPEP8-201ENST00000442866 260 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX25Q9H3E2 RPL23AP3-201ENST00000453844 468 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 RPS23P5-201ENST00000495419 428 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.93□□□□□ -2.1
SNX25Q9H3E2 AC046134.1-201ENST00000514454 666 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX25Q9H3E2 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
SNX25Q9H3E2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.93□□□□□ -2.1
SNX25Q9H3E2 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 RNA5SP493-201ENST00000364115 91 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 RNA5SP465-201ENST00000391195 109 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AC007677.1-201ENST00000445757 515 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AC016925.1-201ENST00000458303 298 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AL590240.4-201ENST00000616908 390 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AC005562.2-201ENST00000618264 111 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 LINC02555-201ENST00000563933 1951 ntBASIC1.92□□□□□ -2.1
SNX25Q9H3E2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU6-845P-201ENST00000362578 103 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 Y_RNA.160-201ENST00000363677 92 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU4-9P-201ENST00000364951 139 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU6-767P-201ENST00000384132 107 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU6-160P-201ENST00000384591 107 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 MIR548F5-201ENST00000408421 86 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC243428.1-201ENST00000421099 264 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AL139396.1-201ENST00000421137 167 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC004386.2-201ENST00000441858 148 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 MTCO1P44-201ENST00000441935 243 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 MTCO3P8-201ENST00000453691 755 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RPS29P11-201ENST00000496507 171 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC026782.1-201ENST00000512952 449 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU7-30P-201ENST00000516835 62 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 RNU1-54P-201ENST00000517181 120 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 AC137590.2-201ENST00000619709 240 ntBASIC1.91□□□□□ -2.1
SNX25Q9H3E2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
SNX25Q9H3E2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.9□□□□□ -2.1
SNX25Q9H3E2 BX322639.1-202ENST00000423987 2213 ntBASIC1.9□□□□□ -2.1
SNX25Q9H3E2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 RNU6-545P-201ENST00000362681 104 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 SNORD115-8-201ENST00000363856 82 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 SNORD115-32-201ENST00000364079 82 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 SNORD115-38-201ENST00000365037 82 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 RNU6-1283P-201ENST00000365314 105 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 RNU6-438P-201ENST00000365561 103 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.9□□□□□ -2.11
SNX25Q9H3E2 RNU6-876P-201ENST00000391295 104 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms