Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.86□□□□□ -2.11
UBQLN3Q9H347 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBQLN3Q9H347 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
UBQLN3Q9H347 RNA5SP493-201ENST00000364115 91 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 RNU6-767P-201ENST00000384132 107 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.85□□□□□ -2.11
UBQLN3Q9H347 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN3Q9H347 AC139712.2-201ENST00000424302 339 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 MTCO3P46-201ENST00000425787 232 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.85□□□□□ -2.11
UBQLN3Q9H347 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN3Q9H347 RNA5SP57-201ENST00000459463 123 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 AC010928.2-201ENST00000588017 287 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 7SK.7-201ENST00000603504 247 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 TCL6_2.1-201ENST00000615162 119 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 ZNF204P-201ENST00000416749 2397 ntBASIC1.85□□□□□ -2.11
UBQLN3Q9H347 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 Y_RNA.132-201ENST00000363421 102 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 Y_RNA.533-201ENST00000384596 114 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 MIR320B2-201ENST00000408479 138 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AC074085.1-201ENST00000413598 418 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 RPS3AP52-201ENST00000435639 297 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 MTCO3P8-201ENST00000453691 755 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AC116337.1-201ENST00000509680 687 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 RNU7-30P-201ENST00000516835 62 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AL158827.2-201ENST00000602494 330 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 SNRPGP20-201ENST00000604477 205 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 AL691447.3-201ENST00000635020 330 ntBASIC1.84□□□□□ -2.11
UBQLN3Q9H347 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.48-201ENST00000362710 103 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 U8.10-201ENST00000384260 133 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.473-201ENST00000384333 102 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 MT-TL1-201ENST00000386347 75 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 AC107399.1-201ENST00000451226 265 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 snoU13.30-201ENST00000458951 104 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 RPL31P58-201ENST00000469001 379 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 AC046134.1-201ENST00000514454 666 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 RMST_6.1-201ENST00000611980 203 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
UBQLN3Q9H347 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
UBQLN3Q9H347 CENPCP1-201ENST00000533085 2578 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 RNU6-842P-201ENST00000384269 107 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 RNU6-541P-201ENST00000384709 110 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 MIR1289-2-201ENST00000408360 111 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 MIR548K-201ENST00000408406 116 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.82□□□□□ -2.12
UBQLN3Q9H347 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AC016925.1-201ENST00000458303 298 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AC007215.1-201ENST00000464893 276 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.82□□□□□ -2.12
UBQLN3Q9H347 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.82□□□□□ -2.12
UBQLN3Q9H347 MIR3169-201ENST00000578032 83 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 MIR4753-201ENST00000585119 83 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 DUXAP9-208ENST00000622815 614 ntBASIC1.82□□□□□ -2.12
UBQLN3Q9H347 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RNU6-596P-201ENST00000365395 98 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RNU6-418P-201ENST00000384035 107 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 MIR153-2-201ENST00000385225 87 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 MIR300-201ENST00000401138 83 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RNU6-174P-201ENST00000410406 106 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RNA5SP501-201ENST00000410990 112 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RPL37P10-201ENST00000412884 288 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 AL445305.1-201ENST00000432577 575 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 AC007395.1-201ENST00000451333 677 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 SNORD5.1-201ENST00000458800 75 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RPL30P10-201ENST00000488148 337 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RNU6-1016P-201ENST00000516689 94 ntBASIC1.81□□□□□ -2.12
UBQLN3Q9H347 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
UBQLN3Q9H347 RRN3P3-201ENST00000549207 578 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms