Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC018445.2-201ENST00000622987 260 ntBASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 AC112484.5-201ENST00000624189 228 ntBASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 MIR3914-2-201ENST00000637339 95 ntBASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 AC007256.1-201ENST00000392253 2765 ntBASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LCE3DQ9BYE3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 ZNF702P-202ENST00000434269 1966 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RPL23P2-201ENST00000320371 421 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNA5SP322-201ENST00000363617 119 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNU6-153P-201ENST00000364422 104 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNU6-476P-201ENST00000384726 107 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 MIR515-2-201ENST00000384883 83 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 MIR515-1-201ENST00000384884 83 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 MIR624-201ENST00000385217 97 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNU6-460P-201ENST00000391158 108 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 SNORD66.1-201ENST00000391230 76 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 SNORA26.7-201ENST00000391288 122 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 MIR1179-201ENST00000408703 91 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNU6-588P-201ENST00000410281 105 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RN7SKP206-201ENST00000410823 293 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AL158823.1-201ENST00000418441 478 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC018634.1-201ENST00000437554 401 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC016831.4-201ENST00000438302 307 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AL161788.1-201ENST00000441805 169 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC025750.2-201ENST00000442609 450 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC112498.1-201ENST00000444401 332 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RPS4XP11-201ENST00000446897 772 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 HMGN2P18-201ENST00000450680 270 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RPS29P21-201ENST00000496272 170 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC092349.1-201ENST00000504903 310 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC025554.1-201ENST00000505641 188 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RN7SKP66-201ENST00000516681 231 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RNA5SP143-201ENST00000516936 115 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 MIR4438-201ENST00000585271 93 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC110741.2-201ENST00000605278 268 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 U2.20-201ENST00000613956 192 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RN7SL722P-201ENST00000617780 284 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 RN7SL565P-201ENST00000618246 284 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 U6.73-201ENST00000619194 103 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 XIST_intron.1-201ENST00000619444 68 ntBASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
LCE3DQ9BYE3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 FAM35DP-201ENST00000323387 2712 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 MIR423-201ENST00000362201 94 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNA5SP175-201ENST00000364275 119 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU1-132P-201ENST00000364300 164 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 SNORD24-201ENST00000383884 75 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 SNORD14D-201ENST00000384390 87 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 SNORA20-201ENST00000384662 132 ntBASIC1.13□□□□□ -2.23
LCE3DQ9BYE3 MIR3074-201ENST00000384885 81 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms