Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USB1Q9BQ65 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USB1Q9BQ65 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
USB1Q9BQ65 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USB1Q9BQ65 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.1□□□□□ -1.75
USB1Q9BQ65 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USB1Q9BQ65 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.1□□□□□ -1.75
USB1Q9BQ65 Y_RNA.362-201ENST00000365518 110 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 MIR129-1-201ENST00000384972 72 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 RNA5SP252-201ENST00000391131 119 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 RN7SKP202-201ENST00000410439 330 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 RN7SL585P-201ENST00000470538 280 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 AC025445.1-201ENST00000502728 300 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.1□□□□□ -1.75
USB1Q9BQ65 TOMM20P2-201ENST00000540082 421 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.1□□□□□ -1.75
USB1Q9BQ65 U3.53-201ENST00000628922 216 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 MFSD8-216ENST00000641147 4009 ntBASIC4.1□□□□□ -1.75
USB1Q9BQ65 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USB1Q9BQ65 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USB1Q9BQ65 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USB1Q9BQ65 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USB1Q9BQ65 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
USB1Q9BQ65 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
USB1Q9BQ65 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
USB1Q9BQ65 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
USB1Q9BQ65 AC002546.1-201ENST00000588041 2504 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 RNU1-20P-201ENST00000363314 162 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 RNU6-573P-201ENST00000383938 106 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 SNORD77.3-201ENST00000391113 65 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.09□□□□□ -1.75
USB1Q9BQ65 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.09□□□□□ -1.75
USB1Q9BQ65 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.09□□□□□ -1.75
USB1Q9BQ65 AL133162.1-201ENST00000463228 453 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 IGLV2-34-201ENST00000490007 283 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 PPBPP1-201ENST00000510807 373 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 RNA5SP112-201ENST00000515937 99 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 RNU6-240P-201ENST00000516098 97 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 RNU6-693P-201ENST00000516134 107 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 RN7SKP12-201ENST00000516275 143 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 IGKV3-31-201ENST00000523109 329 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 MIR5009-201ENST00000578736 100 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 Y_RNA.818-201ENST00000618813 71 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 MIR7154-201ENST00000620673 73 ntBASIC4.09□□□□□ -1.75
USB1Q9BQ65 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
USB1Q9BQ65 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.09□□□□□ -1.76
USB1Q9BQ65 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
USB1Q9BQ65 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
USB1Q9BQ65 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 RNU1-32P-201ENST00000363937 159 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 Y_RNA.213-201ENST00000364178 111 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USB1Q9BQ65 MIR520G-201ENST00000385064 90 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 RNU1-82P-201ENST00000390851 165 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 Y_RNA.625-201ENST00000411256 107 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USB1Q9BQ65 SNRPGP5-201ENST00000456003 220 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 PPIAP15-201ENST00000479662 484 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 AC008897.1-201ENST00000494006 347 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 Y_RNA.666-201ENST00000516187 112 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 AC090115.4-201ENST00000609970 188 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 AC011944.2-201ENST00000624440 683 ntBASIC4.08□□□□□ -1.76
USB1Q9BQ65 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
USB1Q9BQ65 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.07□□□□□ -1.76
USB1Q9BQ65 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USB1Q9BQ65 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USB1Q9BQ65 RNU6-414P-201ENST00000363705 104 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 RNA5SP505-201ENST00000364748 108 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 RNU6-820P-201ENST00000384273 107 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 MIR759-201ENST00000390224 91 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 AC016397.1-201ENST00000412463 242 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.07□□□□□ -1.76
USB1Q9BQ65 HMGN1P7-201ENST00000491722 313 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 AL592156.1-201ENST00000508758 304 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 AC068339.1-201ENST00000526965 141 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 MIR6798-201ENST00000612887 67 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 AC140113.4-201ENST00000622087 222 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 MIR2052-201ENST00000636055 55 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.07□□□□□ -1.76
USB1Q9BQ65 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
USB1Q9BQ65 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
USB1Q9BQ65 AL049781.1-201ENST00000623195 3585 ntBASIC4.07□□□□□ -1.76
USB1Q9BQ65 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USB1Q9BQ65 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.06□□□□□ -1.76
USB1Q9BQ65 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USB1Q9BQ65 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
USB1Q9BQ65 RNU2-37P-201ENST00000410695 177 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms