Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RNA5SP493-201ENST00000364115 91 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 SNORD81.2-201ENST00000365153 76 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 Y_RNA.390-201ENST00000383932 102 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 RNU6-245P-201ENST00000384020 107 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 RNU6-17P-201ENST00000384245 107 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 RNU6-18P-201ENST00000384527 107 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 MIR634-201ENST00000385208 97 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CPNE1Q99829 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CPNE1Q99829 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 AC096920.1-201ENST00000423991 241 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 AC139712.2-201ENST00000424302 339 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 USMG5P1-201ENST00000425964 177 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 AC096638.1-201ENST00000444678 216 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.93□□□□□ -2.1
CPNE1Q99829 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
CPNE1Q99829 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 HMGN1P12-201ENST00000499125 195 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 Y_RNA.670-201ENST00000516255 105 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 RNU6-58P-201ENST00000517143 103 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 CBX3P8-201ENST00000532412 525 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.93□□□□□ -2.1
CPNE1Q99829 AC104581.2-201ENST00000572227 430 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 AL590240.4-201ENST00000616908 390 ntBASIC1.93□□□□□ -2.1
CPNE1Q99829 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
CPNE1Q99829 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.93□□□□□ -2.1
CPNE1Q99829 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CPNE1Q99829 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.92□□□□□ -2.1
CPNE1Q99829 RNU6-545P-201ENST00000362681 104 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 SNORD114-6-201ENST00000364393 72 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 Y_RNA.473-201ENST00000384333 102 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 RNU6-541P-201ENST00000384709 110 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 MIR1283-1-201ENST00000408494 87 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.92□□□□□ -2.1
CPNE1Q99829 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CPNE1Q99829 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
CPNE1Q99829 Y_RNA.635-201ENST00000459041 101 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.92□□□□□ -2.1
CPNE1Q99829 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.92□□□□□ -2.1
CPNE1Q99829 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
CPNE1Q99829 AC027288.2-201ENST00000553028 243 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.92□□□□□ -2.1
CPNE1Q99829 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 MIR4801-201ENST00000582704 82 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 MIR4753-201ENST00000585119 83 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 AC009229.3-201ENST00000608056 282 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 PISRT1.1-201ENST00000616930 107 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 MTND4P12-201ENST00000498999 1377 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CPNE1Q99829 ZNF355P-201ENST00000427301 3216 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.92□□□□□ -2.1
CPNE1Q99829 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPNE1Q99829 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
CPNE1Q99829 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.92□□□□□ -2.1
CPNE1Q99829 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.91□□□□□ -2.1
CPNE1Q99829 MIR340-201ENST00000362125 95 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 Y_RNA.48-201ENST00000362710 103 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.91□□□□□ -2.1
CPNE1Q99829 RNA5SP425-201ENST00000410336 112 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CPNE1Q99829 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CPNE1Q99829 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.91□□□□□ -2.1
CPNE1Q99829 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.91□□□□□ -2.1
CPNE1Q99829 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.91□□□□□ -2.1
CPNE1Q99829 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.91□□□□□ -2.1
CPNE1Q99829 AC134698.4-201ENST00000523451 826 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 RRN3P3-201ENST00000549207 578 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 AL355073.2-201ENST00000612106 557 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 AC098657.3-201ENST00000620434 263 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 U1.36-201ENST00000620684 176 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 SCARNA15.3-201ENST00000626315 122 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 SCARNA4.1-201ENST00000628597 123 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 IGHVIII-44-202ENST00000636235 289 ntBASIC1.91□□□□□ -2.1
CPNE1Q99829 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms