Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNA5SP309-201ENST00000516670 106 ntBASIC4.42□□□□□ -1.7
PHOX2BQ99453 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 AC125257.1-201ENST00000560400 2930 ntBASIC4.42□□□□□ -1.7
PHOX2BQ99453 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 AC140113.4-201ENST00000622087 222 ntBASIC4.42□□□□□ -1.7
PHOX2BQ99453 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.42□□□□□ -1.7
PHOX2BQ99453 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHOX2BQ99453 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHOX2BQ99453 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHOX2BQ99453 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHOX2BQ99453 Y_RNA.242-201ENST00000364473 110 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 Y_RNA.495-201ENST00000384435 112 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 RNVU1-14-201ENST00000384770 164 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 MIR562-201ENST00000384894 95 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 MIR183-201ENST00000384958 110 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 U6atac.2-201ENST00000408644 118 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 RNU6-1077P-201ENST00000410506 102 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 ATP5EP1-201ENST00000510257 156 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 RNU6-504P-201ENST00000516568 104 ntBASIC4.41□□□□□ -1.7
PHOX2BQ99453 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHOX2BQ99453 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PHOX2BQ99453 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHOX2BQ99453 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHOX2BQ99453 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
PHOX2BQ99453 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHOX2BQ99453 AC103988.1-201ENST00000566382 2177 ntBASIC4.4□□□□□ -1.7
PHOX2BQ99453 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.4□□□□□ -1.7
PHOX2BQ99453 RNA5SP295-201ENST00000362655 121 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 RNU1-22P-201ENST00000363334 158 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 RNU6-309P-201ENST00000364573 106 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 AF228730.3-201ENST00000436691 102 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 RPL31P61-201ENST00000496160 376 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 RNU6-586P-201ENST00000517265 104 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 AL022345.2-201ENST00000606307 135 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 AC013412.1-201ENST00000610687 192 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 DHX9P1-201ENST00000436565 3076 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PHOX2BQ99453 AC018555.1-201ENST00000567548 1980 ntBASIC4.4□□□□□ -1.71
PHOX2BQ99453 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHOX2BQ99453 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHOX2BQ99453 Y_RNA.52-201ENST00000362760 96 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 Y_RNA.796-201ENST00000364268 102 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 Y_RNA.799-201ENST00000364992 102 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 RNU6-1274P-201ENST00000384557 107 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 AC097462.1-201ENST00000514125 324 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 RNU7-149P-201ENST00000516739 59 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 RNU7-172P-201ENST00000517125 64 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 AC011604.1-201ENST00000545978 196 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 U6.105-201ENST00000637379 88 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 AC087190.4-201ENST00000574616 8334 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHOX2BQ99453 AC016588.2-201ENST00000632484 3021 ntBASIC4.39□□□□□ -1.71
PHOX2BQ99453 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PHOX2BQ99453 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHOX2BQ99453 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHOX2BQ99453 RNU1-83P-201ENST00000363426 164 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 RNU6-1209P-201ENST00000363655 107 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 RNA5SP72-201ENST00000364442 117 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 Y_RNA.369-201ENST00000365568 117 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 MIR548A1-201ENST00000385041 97 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 RPS4XP11-201ENST00000446897 772 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 RN7SL517P-201ENST00000462240 305 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 AC010469.1-201ENST00000463864 576 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 RNU6-113P-201ENST00000516653 101 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 MIR4438-201ENST00000585271 93 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
PHOX2BQ99453 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHOX2BQ99453 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHOX2BQ99453 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PHOX2BQ99453 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHOX2BQ99453 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.37□□□□□ -1.71
PHOX2BQ99453 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PHOX2BQ99453 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHOX2BQ99453 AP000567.1-201ENST00000406413 156 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 AL031121.1-201ENST00000406553 254 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.37□□□□□ -1.71
PHOX2BQ99453 AC069285.2-201ENST00000440210 275 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 AL021397.1-201ENST00000451806 248 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 RAC1P2-201ENST00000511164 579 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 RNA5SP497-201ENST00000516081 97 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 RNU6-781P-201ENST00000516377 101 ntBASIC4.37□□□□□ -1.71
PHOX2BQ99453 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms