| ARAP1 | Q96P48 | ADI1P3-201 | ENST00000549509 | 470 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AC104073.3-201 | ENST00000610942 | 955 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | DAOA-AS1_2.1-201 | ENST00000614829 | 187 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AL513423.1-201 | ENST00000621695 | 132 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AL603839.4-201 | ENST00000624658 | 1005 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | MTND5P16-201 | ENST00000460269 | 1703 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | RNU6-1141P-201 | ENST00000364520 | 107 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | RNU4-48P-201 | ENST00000365559 | 182 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | MIR653-201 | ENST00000385279 | 96 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | RNU6ATAC33P-201 | ENST00000408647 | 126 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AC244098.3-201 | ENST00000424803 | 96 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | RPL23AP50-201 | ENST00000434149 | 455 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AC005019.2-201 | ENST00000434321 | 359 nt | TSL 5 BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | HMGB1P29-201 | ENST00000505659 | 499 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | NAF1-205 | ENST00000509434 | 385 nt | TSL 3 BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AL356133.2-201 | ENST00000521572 | 371 nt | TSL 3 BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AL158211.1-201 | ENST00000566763 | 763 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AC080078.2-201 | ENST00000603766 | 501 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | AC006927.4-201 | ENST00000639187 | 543 nt | BASIC | -0.03 | □□□□□ -2.41 | | |
| ARAP1 | Q96P48 | snoU2-30.2-201 | ENST00000362805 | 70 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | Y_RNA.330-201 | ENST00000365230 | 109 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU4-45P-201 | ENST00000365469 | 141 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | PDCL2P1-201 | ENST00000419302 | 352 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC078809.1-201 | ENST00000427601 | 140 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL596220.1-202 | ENST00000429768 | 314 nt | TSL 3 BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL136972.1-201 | ENST00000443471 | 351 nt | TSL 3 BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | LINC01399-202 | ENST00000458450 | 244 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MTATP6P9-201 | ENST00000515039 | 680 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC106038.2-201 | ENST00000520706 | 568 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC026616.1-201 | ENST00000523157 | 525 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC090517.1-201 | ENST00000569307 | 266 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR4753-201 | ENST00000585119 | 83 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL162424.1-201 | ENST00000602325 | 221 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | DEFB131E-202 | ENST00000602581 | 683 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | LARP7P1-201 | ENST00000605576 | 316 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC092354.1-201 | ENST00000606057 | 376 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNA5SP219-201 | ENST00000390940 | 113 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | CALM2P3-201 | ENST00000400429 | 449 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL603865.2-201 | ENST00000401679 | 213 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | CTHRC1P1-201 | ENST00000605383 | 469 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC131159.1-201 | ENST00000621854 | 213 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | OR5AK4P-201 | ENST00000635912 | 903 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MTND4P5-201 | ENST00000435821 | 1374 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | STARD6-201 | ENST00000307844 | 663 nt | APPRIS P1 TSL 1 (best) BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-545P-201 | ENST00000362681 | 104 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6V-201 | ENST00000384105 | 107 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | SNORA75.2-201 | ENST00000391138 | 150 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | SNORA75.3-201 | ENST00000391231 | 150 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNA5SP201-201 | ENST00000410316 | 124 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AF124730.1-201 | ENST00000430001 | 327 nt | TSL 2 BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RPL17P35-201 | ENST00000432217 | 549 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | DAP3P1-201 | ENST00000441522 | 278 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | SNORA70.12-201 | ENST00000516084 | 153 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC008147.1-201 | ENST00000551284 | 325 nt | TSL 3 BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL035425.2-201 | ENST00000563887 | 563 nt | APPRIS P1 TSL 4 BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MTND1P15-201 | ENST00000579262 | 949 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR5692A1-201 | ENST00000580523 | 69 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC091805.2-201 | ENST00000603848 | 235 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL157786.1-207 | ENST00000627771 | 695 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR103A1-201 | ENST00000362165 | 78 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | U8.7-201 | ENST00000364940 | 136 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-609P-201 | ENST00000365459 | 107 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-417P-201 | ENST00000384712 | 107 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | Y_RNA.578-201 | ENST00000390903 | 88 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | ZNF736P7Y-201 | ENST00000425158 | 820 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | HMGN2P34-201 | ENST00000437647 | 269 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC024382.1-201 | ENST00000520224 | 292 nt | TSL 3 BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC027419.1-201 | ENST00000522976 | 328 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | OR8K2P-201 | ENST00000524645 | 927 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR5697-201 | ENST00000578045 | 78 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC008752.3-201 | ENST00000588113 | 712 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL162730.1-201 | ENST00000605734 | 292 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL078595.3-201 | ENST00000623815 | 1166 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL359697.1-201 | ENST00000624879 | 587 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR4315-1-201 | ENST00000636800 | 73 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR4315-2-201 | ENST00000640925 | 73 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-462P-201 | ENST00000362659 | 105 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNA5SP214-201 | ENST00000363378 | 118 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | Y_RNA.311-201 | ENST00000365068 | 96 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | TRAJ54-201 | ENST00000390484 | 60 nt | APPRIS P1 BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RPL22P18-201 | ENST00000417197 | 377 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MTCO2P34-201 | ENST00000421994 | 607 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | USP9YP28-201 | ENST00000435142 | 589 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AL162725.1-201 | ENST00000435405 | 301 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | PTPRG-AS1-202 | ENST00000466893 | 823 nt | TSL 4 BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNU6-377P-201 | ENST00000515965 | 102 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | RNA5SP227-201 | ENST00000516184 | 113 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | LINC02155-201 | ENST00000519215 | 407 nt | TSL 5 BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | MIR3678-201 | ENST00000578455 | 94 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | AC100812.1-201 | ENST00000607622 | 580 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| ARAP1 | Q96P48 | uc_338.6-201 | ENST00000613544 | 171 nt | BASIC | -0.08 | □□□□□ -2.42 | | |