Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 snoU13.30-201ENST00000458951 104 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 SNORD19.2-201ENST00000516978 73 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AC010928.2-201ENST00000588017 287 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AL391813.1-201ENST00000603098 260 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 MIR376A1-201ENST00000616574 68 ntBASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.75□□□□□ -1.97
VCPIP1Q96JH7 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RNU6-222P-201ENST00000362438 107 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RNU6-338P-201ENST00000383888 105 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RNU6-968P-201ENST00000384076 107 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RNY3P4-201ENST00000384428 101 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RNU6-19P-201ENST00000384718 107 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 MIR548H3-201ENST00000408771 118 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC096649.2-201ENST00000416186 393 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AL358453.1-201ENST00000422522 250 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 MTND2P29-201ENST00000438595 412 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 SUMO1P3-201ENST00000439961 304 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC009296.1-201ENST00000443146 155 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AL353705.4-201ENST00000449661 238 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC006026.2-201ENST00000457376 180 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 MED28P2-201ENST00000475771 317 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RPL23AP75-201ENST00000491601 451 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 RNU6-138P-201ENST00000515952 107 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC022868.1-201ENST00000517767 391 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 DEFB108E-201ENST00000524692 240 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC090617.3-201ENST00000573670 475 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC136932.1-201ENST00000574771 208 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC009163.5-201ENST00000575421 637 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 MIR4300-201ENST00000581016 96 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 AL365434.2-201ENST00000607979 234 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.74□□□□□ -1.97
VCPIP1Q96JH7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.20-201ENST00000362479 113 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 SNORD115-46-201ENST00000390982 71 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 RNA5SP210-201ENST00000391034 120 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AL590135.1-201ENST00000422215 156 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AC092427.1-202ENST00000430569 476 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AC243964.1-201ENST00000441814 261 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AL031659.1-201ENST00000447075 539 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AL139109.1-201ENST00000455491 297 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 RPL30P1-201ENST00000488676 339 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 SNORA31.6-201ENST00000516241 130 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 MIR2355-201ENST00000517199 87 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AC023824.2-201ENST00000566185 400 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AC011476.5-201ENST00000615594 130 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 AC240442.1-201ENST00000616055 283 ntBASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VCPIP1Q96JH7 LINC02555-201ENST00000563933 1951 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.54-201ENST00000362766 105 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.65-201ENST00000362846 100 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 SNORD56.1-201ENST00000362913 68 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 RNU6-200P-201ENST00000364743 107 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.539-201ENST00000384635 107 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MIR32-201ENST00000384965 70 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 AL079342.1-201ENST00000401460 267 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 GZMAP1-201ENST00000503054 631 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 AC091874.1-201ENST00000511402 339 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 SNORA31.23-201ENST00000517219 133 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 CR383656.8-201ENST00000549046 145 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MIR4659A-201ENST00000580269 81 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.72□□□□□ -1.97
VCPIP1Q96JH7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 357.3 ms