Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 Y_RNA.121-201ENST00000363309 113 ntBASIC3.57□□□□□ -1.84
SHISA4Q96DD7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.57□□□□□ -1.84
SHISA4Q96DD7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 RN7SKP220-201ENST00000410611 288 ntBASIC3.57□□□□□ -1.84
SHISA4Q96DD7 RNU6-735P-201ENST00000410612 107 ntBASIC3.57□□□□□ -1.84
SHISA4Q96DD7 RNA5SP367-201ENST00000516557 118 ntBASIC3.57□□□□□ -1.84
SHISA4Q96DD7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 AC009163.5-201ENST00000575421 637 ntBASIC3.57□□□□□ -1.84
SHISA4Q96DD7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA4Q96DD7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNU6-1272P-201ENST00000362776 107 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 Y_RNA.101-201ENST00000363154 102 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 SNORA71.1-201ENST00000364523 117 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNU6-793P-201ENST00000384233 104 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 SNORA26.3-201ENST00000391119 136 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNU6-131P-201ENST00000391144 107 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 AL512633.1-201ENST00000399931 655 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 MIR320B2-201ENST00000408479 138 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNA5SP390-201ENST00000410191 113 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 BTF3P11-201ENST00000426582 477 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RAB28P5-201ENST00000427490 651 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RPL39P29-201ENST00000447779 157 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 AP000705.1-201ENST00000454567 350 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNU7-170P-201ENST00000459303 61 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RPS27AP9-201ENST00000477681 438 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNU6-155P-201ENST00000516347 100 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 MIR3145-201ENST00000580727 82 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 MIR7843-201ENST00000622274 79 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 AC092628.2-201ENST00000622492 339 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHISA4Q96DD7 AC000403.1-201ENST00000613696 3585 ntBASIC3.56□□□□□ -1.84
SHISA4Q96DD7 RNA5SP295-201ENST00000362655 121 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 Y_RNA.75-201ENST00000362927 97 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 Y_RNA.215-201ENST00000364204 112 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RNU6-245P-201ENST00000384020 107 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RNU6-1168P-201ENST00000390831 104 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RNU2-2P-201ENST00000410396 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RPS15AP5-201ENST00000436276 388 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 AC007215.1-201ENST00000464893 276 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 UBL5P3-201ENST00000475112 231 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 SUMO2P18-201ENST00000518873 252 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 MIR3684-201ENST00000579779 74 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 AL356575.1-201ENST00000603008 283 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RNU2-4P-201ENST00000606190 192 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.15-201ENST00000611544 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.16-201ENST00000613119 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.12-201ENST00000613778 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.9-201ENST00000615427 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.11-201ENST00000616345 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.2-201ENST00000616535 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.3-201ENST00000617785 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.19-201ENST00000618602 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 RNU2-1-201ENST00000618664 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.6-201ENST00000619225 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.5-201ENST00000619465 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 U2.10-201ENST00000620268 191 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 AC007318.2-201ENST00000620999 243 ntBASIC3.55□□□□□ -1.84
SHISA4Q96DD7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.55□□□□□ -1.84
SHISA4Q96DD7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHISA4Q96DD7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHISA4Q96DD7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNU6-50P-201ENST00000362356 103 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 Y_RNA.182-201ENST00000363880 111 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNU4-84P-201ENST00000364200 139 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNU4-17P-201ENST00000365598 141 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 SNORA22C-201ENST00000384614 134 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 MIR591-201ENST00000385290 95 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNU2-54P-201ENST00000410299 190 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNA5SP475-201ENST00000410568 110 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 IFNA11P-201ENST00000446352 526 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RPL26P9-201ENST00000457466 433 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNA5SP217-201ENST00000515959 91 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 RNU6-966P-201ENST00000516479 104 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 AL008718.3-201ENST00000610217 321 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
SHISA4Q96DD7 AC091932.3-201ENST00000624223 323 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms