Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ERCC4Q92889 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC4Q92889 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
ERCC4Q92889 AL109809.4-201ENST00000603520 2185 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC4Q92889 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ERCC4Q92889 Y_RNA.16-201ENST00000362421 102 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 RNU5F-3P-201ENST00000363767 117 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 RNU6-961P-201ENST00000363893 105 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AC138623.1-201ENST00000418060 216 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC4Q92889 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC4Q92889 AC009414.1-201ENST00000427200 443 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC4Q92889 Z98949.2-201ENST00000440996 144 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AL121594.1-201ENST00000475906 575 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC4Q92889 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.25□□□□□ -1.89
ERCC4Q92889 SNORA40.9-201ENST00000515895 93 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 DEFB108E-201ENST00000524692 240 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AC233702.2-202ENST00000562547 291 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AC008739.2-201ENST00000597006 317 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 AC010999.1-201ENST00000611856 324 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 PCGEM1.1-201ENST00000613431 131 ntBASIC3.25□□□□□ -1.89
ERCC4Q92889 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC4Q92889 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC4Q92889 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ERCC4Q92889 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.24□□□□□ -1.89
ERCC4Q92889 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.24□□□□□ -1.89
ERCC4Q92889 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.24□□□□□ -1.89
ERCC4Q92889 RNU6-1210P-201ENST00000363775 107 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 RNU4-56P-201ENST00000364700 142 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 Y_RNA.352-201ENST00000365439 102 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 RNU6-378P-201ENST00000384324 107 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 Y_RNA.570-201ENST00000384750 101 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 AL139095.1-201ENST00000404326 391 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.24□□□□□ -1.89
ERCC4Q92889 RNU6-111P-201ENST00000517179 105 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.24□□□□□ -1.89
ERCC4Q92889 AC010900.2-201ENST00000604508 210 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 UCA1.1-201ENST00000620952 75 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 ZNF204P-201ENST00000416749 2397 ntBASIC3.24□□□□□ -1.89
ERCC4Q92889 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.23□□□□□ -1.89
ERCC4Q92889 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.23□□□□□ -1.89
ERCC4Q92889 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ERCC4Q92889 RNU4-90P-201ENST00000362773 141 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 Y_RNA.230-201ENST00000364348 109 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 RNU6-290P-201ENST00000365212 101 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 RNU1-57P-201ENST00000384491 166 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 MIR208B-201ENST00000401172 77 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 FO393413.1-201ENST00000402892 195 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 Y_RNA.602-201ENST00000410535 92 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 RNU5A-5P-201ENST00000411054 116 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 RNU2-64P-201ENST00000411315 191 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 AC009310.1-201ENST00000414414 451 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 AC010095.1-201ENST00000443543 144 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 RPS3P1-201ENST00000456781 192 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 SEM1P1-201ENST00000506694 209 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.23□□□□□ -1.89
ERCC4Q92889 Y_RNA.683-201ENST00000516508 93 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 RNU6-826P-201ENST00000516827 104 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 CYCSP23-201ENST00000519781 313 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.23□□□□□ -1.89
ERCC4Q92889 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.23□□□□□ -1.89
ERCC4Q92889 MIR4325-201ENST00000583049 90 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 SNORD113-5-201ENST00000607261 78 ntBASIC3.23□□□□□ -1.89
ERCC4Q92889 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.23□□□□□ -1.89
ERCC4Q92889 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ERCC4Q92889 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.22□□□□□ -1.89
ERCC4Q92889 RNU6-626P-201ENST00000363354 107 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 RNY1-201ENST00000364228 113 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 SNORA71.1-201ENST00000364523 117 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.22□□□□□ -1.89
ERCC4Q92889 RPL27AP5-201ENST00000469428 449 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 AC074133.1-201ENST00000515696 183 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 SNORA25.14-201ENST00000516481 132 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.22□□□□□ -1.89
ERCC4Q92889 MZT1P2-201ENST00000604387 248 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 AC005000.2-201ENST00000605468 310 ntBASIC3.22□□□□□ -1.89
ERCC4Q92889 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
ERCC4Q92889 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ERCC4Q92889 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ERCC4Q92889 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.89
ERCC4Q92889 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC4Q92889 RNU1-62P-201ENST00000362599 164 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 RNU6-655P-201ENST00000362858 107 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 Y_RNA.179-201ENST00000363844 90 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 RNU6-20P-201ENST00000384106 107 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 MIR512-1-201ENST00000384913 84 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 SNORA48.5-201ENST00000391143 135 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 AL603910.2-201ENST00000407268 136 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 Y_RNA.595-201ENST00000410403 105 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC4Q92889 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC4Q92889 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC4Q92889 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC4Q92889 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms