Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RNF139Q8WU17 RNU4-66P-201ENST00000365199 138 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 MTND3P16-201ENST00000452205 344 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC016632.1-201ENST00000503994 196 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 RPL39P5-202ENST00000512505 151 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC100821.1-201ENST00000523153 2479 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 HSPE1P4-201ENST00000550617 308 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 AC092747.3-201ENST00000603769 301 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 SNORA43.4-201ENST00000629559 138 ntBASIC1.36□□□□□ -2.19
RNF139Q8WU17 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.36□□□□□ -2.19
RNF139Q8WU17 MIR340-201ENST00000362125 95 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 SNORD37.1-201ENST00000390968 65 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AP000275.1-201ENST00000411943 390 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 ARL5AP1-201ENST00000418991 388 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.35□□□□□ -2.19
RNF139Q8WU17 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.35□□□□□ -2.19
RNF139Q8WU17 Z82205.1-201ENST00000428456 297 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 TIMM9P3-201ENST00000428659 274 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.35□□□□□ -2.19
RNF139Q8WU17 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.35□□□□□ -2.19
RNF139Q8WU17 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.35□□□□□ -2.19
RNF139Q8WU17 Y_RNA.654-201ENST00000497848 106 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AC091885.1-201ENST00000506658 268 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 RNU5F-4P-201ENST00000516581 114 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 EIF4A1P12-201ENST00000551910 141 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.35□□□□□ -2.19
RNF139Q8WU17 MIR5692C1-201ENST00000585309 91 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AC078795.3-201ENST00000602913 472 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AC092807.2-201ENST00000609367 243 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AC064836.2-201ENST00000609491 462 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
RNF139Q8WU17 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RNF139Q8WU17 AL159152.1-201ENST00000635019 2587 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 RNU6-522P-201ENST00000364497 107 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 RNU6-1026P-201ENST00000384465 108 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 RNU6-1068P-201ENST00000410958 103 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.34□□□□□ -2.19
RNF139Q8WU17 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.34□□□□□ -2.19
RNF139Q8WU17 MTCO3P29-201ENST00000432119 779 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 MTND1P1-201ENST00000445453 368 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC016925.1-201ENST00000458303 298 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 RNU6-1208P-201ENST00000459588 107 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 RPS29P27-201ENST00000463711 170 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC105313.1-201ENST00000509121 353 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
RNF139Q8WU17 RRN3P3-201ENST00000549207 578 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AL512360.1-201ENST00000555346 234 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AL359821.1-201ENST00000605519 182 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AL121757.2-201ENST00000611223 313 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AC093783.1-201ENST00000612976 329 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 PCGEM1.1-201ENST00000613431 131 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 AL136221.1-201ENST00000621449 509 ntBASIC1.34□□□□□ -2.19
RNF139Q8WU17 MTND5P35-201ENST00000557537 1720 ntBASIC1.34□□□□□ -2.2
RNF139Q8WU17 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 Y_RNA.372-201ENST00000365599 102 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 RNU6-1329P-201ENST00000365664 107 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 RNU6-483P-201ENST00000384088 108 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 Y_RNA.436-201ENST00000384097 102 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 SNORA36A-201ENST00000384221 132 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 Y_RNA.517-201ENST00000384551 106 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 RNU6-908P-201ENST00000410160 94 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 EIF1P1-201ENST00000421436 341 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.33□□□□□ -2.2
RNF139Q8WU17 RNU7-14P-201ENST00000459331 62 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AC008628.2-201ENST00000502605 298 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 ATP5EP1-201ENST00000510257 156 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 Y_RNA.704-201ENST00000516851 102 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AC087854.1-201ENST00000519706 414 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 RNU6-323P-201ENST00000521915 107 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.33□□□□□ -2.2
RNF139Q8WU17 AC021231.3-201ENST00000558497 370 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 CYP4A27P-201ENST00000567218 190 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 RNU6-89P-201ENST00000606519 100 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AF250324.2-201ENST00000608299 610 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 FAM157A-202ENST00000615155 405 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
RNF139Q8WU17 AC121333.1-201ENST00000567488 2709 ntBASIC1.32□□□□□ -2.2
RNF139Q8WU17 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
RNF139Q8WU17 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms