Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEDD1Q8NHV4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.15□□□□□ -1.74
NEDD1Q8NHV4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NEDD1Q8NHV4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
NEDD1Q8NHV4 AC092268.1-201ENST00000342691 405 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 Y_RNA.219-201ENST00000364232 113 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 Y_RNA.549-201ENST00000384657 102 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 RNU6-440P-201ENST00000390882 105 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 SNORA31.23-201ENST00000517219 133 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 CR383656.8-201ENST00000549046 145 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 AC099778.2-201ENST00000610904 211 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 U73479.1-201ENST00000618062 168 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 MIR3529-201ENST00000637713 78 ntBASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
NEDD1Q8NHV4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 AC093908.1-201ENST00000623125 8092 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 SNORD17-201ENST00000390930 237 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 RNA5SP225-201ENST00000410874 135 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 RPL21P10-201ENST00000463521 490 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 AP000873.1-201ENST00000463987 400 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 AC084357.1-201ENST00000473404 255 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 RNU6-107P-201ENST00000516643 102 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 uc_338.32-201ENST00000615087 172 ntBASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEDD1Q8NHV4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 ZNF720P1-201ENST00000562403 1939 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 RNU4-35P-201ENST00000362588 141 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 RNU1-18P-201ENST00000363062 164 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 SNORA70.4-201ENST00000365509 134 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 SNORA18.3-201ENST00000384122 132 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 RNU6-820P-201ENST00000384273 107 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 RNU6-813P-201ENST00000384691 107 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 CYCSP35-201ENST00000451978 304 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 AC008155.2-201ENST00000464337 397 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 AC025518.1-201ENST00000479856 347 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 AL356575.1-201ENST00000603008 283 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 AC134878.1-201ENST00000619901 243 ntBASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NEDD1Q8NHV4 MFSD8-233ENST00000641482 4860 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNA5SP50-201ENST00000363731 107 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 SNORD46.1-201ENST00000364139 104 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU6-283P-201ENST00000364788 107 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 SNORD87-201ENST00000364849 89 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU6-629P-201ENST00000384061 103 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU6-136P-201ENST00000384663 107 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 MIR34B-201ENST00000385076 84 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 SNORD12C-201ENST00000386307 89 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU2-32P-201ENST00000411193 191 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 AC004866.1-201ENST00000411748 78 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RPL27AP8-201ENST00000424277 446 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 AC006989.1-201ENST00000427212 131 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RN7SL594P-201ENST00000470590 287 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU6-197P-201ENST00000516680 100 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 RNU4-60P-201ENST00000517239 135 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 AC025647.1-201ENST00000517879 253 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 AC007012.1-201ENST00000567192 175 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 AC010733.2-201ENST00000589496 5702 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 FAM35DP-201ENST00000323387 2712 ntBASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.12□□□□□ -1.75
NEDD1Q8NHV4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 RNU1-100P-201ENST00000365255 165 ntBASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 RNU6-484P-201ENST00000384016 107 ntBASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 MIR450A2-201ENST00000385022 100 ntBASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 RN7SKP111-201ENST00000410349 271 ntBASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 RNA5SP504-201ENST00000410676 117 ntBASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 AL135786.1-201ENST00000415892 214 ntBASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.11□□□□□ -1.75
NEDD1Q8NHV4 PRSS3P4-201ENST00000453323 162 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms