Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 MIR9-1-201ENST00000385198 89 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AL512633.1-201ENST00000399931 655 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AC024067.1-201ENST00000426199 223 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 TMSB4XP3-201ENST00000445144 114 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 SNORD2.1-201ENST00000458762 69 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 snoU13.28-201ENST00000459235 104 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AC074133.1-201ENST00000515696 183 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 RNU1-61P-201ENST00000516107 151 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 MIR6817-201ENST00000615588 66 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AC004467.1-201ENST00000615678 330 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AC099654.7-201ENST00000635788 2127 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 AC092593.1-201ENST00000515413 1815 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AC002543.1-201ENST00000299783 1954 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 RNA5SP68-201ENST00000363885 119 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 RNU6-793P-201ENST00000384233 104 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 MIR208B-201ENST00000401172 77 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AC007215.1-201ENST00000464893 276 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 RNU6-966P-201ENST00000516479 104 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 MIR2114-201ENST00000516645 80 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AC104465.1-201ENST00000611365 139 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 AC092628.2-201ENST00000622492 339 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 SNORD98-201ENST00000636377 67 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 BX322639.1-202ENST00000423987 2213 ntBASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00116Q8NCU8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.8-201ENST00000362353 102 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.101-201ENST00000363154 102 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RNU4-80P-201ENST00000363200 141 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RNU6-727P-201ENST00000363592 107 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.240-201ENST00000364469 95 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RNU4-56P-201ENST00000364700 142 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 SNORA1.3-201ENST00000384676 136 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AL133475.1-201ENST00000404414 305 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AL591034.1-201ENST00000407447 340 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RNA5SP21-201ENST00000410917 96 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RAB28P5-201ENST00000427490 651 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AC107626.1-201ENST00000471084 183 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AC091179.3-201ENST00000474761 144 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AIG1P1-201ENST00000503376 148 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RNU6-346P-201ENST00000516288 111 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 MRPS18CP4-201ENST00000535821 231 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 CYP4A27P-201ENST00000567218 190 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 AC105137.2-201ENST00000569073 466 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 MIR3145-201ENST00000580727 82 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 HSPE1P7-201ENST00000604681 321 ntBASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.59□□□□□ -1.83
LINC00116Q8NCU8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNU6-799P-201ENST00000363567 107 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 Y_RNA.217-201ENST00000364214 105 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNA5SP240-201ENST00000365355 128 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNU6-804P-201ENST00000384286 107 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 MIR548I2-201ENST00000408348 149 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 MIR320B2-201ENST00000408479 138 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNA5SP239-201ENST00000410218 129 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 AC009963.1-201ENST00000417265 157 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 Y_RNA.641-201ENST00000459414 105 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 AL121594.1-201ENST00000475906 575 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNU6-191P-201ENST00000516295 94 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNU6-155P-201ENST00000516347 100 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNA5SP148-201ENST00000516527 94 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 AP005660.1-201ENST00000522972 293 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 AC027176.1-201ENST00000560204 514 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 AC091932.3-201ENST00000624223 323 ntBASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LINC00116Q8NCU8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 Y_RNA.262-201ENST00000364641 102 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 RNU6-245P-201ENST00000384020 107 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 RNU6-1310P-201ENST00000384153 107 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 RNU6-19P-201ENST00000384718 107 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 ELOCP21-201ENST00000412558 336 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 MIR3144-201ENST00000579460 79 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 MIR3923-201ENST00000579521 83 ntBASIC3.57□□□□□ -1.84
LINC00116Q8NCU8 MIR4308-201ENST00000580634 81 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms