Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 Y_RNA.5-201ENST00000362334 102 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 RNU6-874P-201ENST00000362390 105 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 SNORD115-8-201ENST00000363856 82 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 RNU6-944P-201ENST00000364023 107 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 SNORD32B-201ENST00000364460 84 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 Y_RNA.252-201ENST00000364556 101 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 SNORD115-38-201ENST00000365037 82 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 Y_RNA.319-201ENST00000365138 92 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 MIR487A-201ENST00000385009 80 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 MIR625-201ENST00000385047 85 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 RNU6-1156P-201ENST00000410365 100 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 RN7SKP223-201ENST00000410582 62 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 AL354751.2-201ENST00000415471 210 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 AC007677.1-201ENST00000445757 515 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 AC105758.1-201ENST00000506038 399 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 AC027288.2-201ENST00000553028 243 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 uc_338.22-201ENST00000622722 187 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 MIR6873-201ENST00000622788 63 ntBASIC2.28□□□□□ -2.04
PCDH20Q8N6Y1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.138-201ENST00000363462 102 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.428-201ENST00000384078 102 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 CBX3P6-201ENST00000430257 527 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AL137792.2-201ENST00000443484 235 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AC007215.1-201ENST00000464893 276 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 RNU7-4P-201ENST00000516961 62 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 SNORD116.3-201ENST00000517176 78 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 HSPE1P18-201ENST00000517602 280 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AC018630.3-201ENST00000542637 96 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AL355297.2-201ENST00000604792 129 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 AC134503.1-201ENST00000633048 54 ntBASIC2.27□□□□□ -2.05
PCDH20Q8N6Y1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 U8.2-201ENST00000363156 134 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.106-201ENST00000363189 100 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNU1-23P-201ENST00000363361 144 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNU6-137P-201ENST00000363680 108 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 SNORA38-201ENST00000363946 132 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.364-201ENST00000365532 101 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.445-201ENST00000384168 102 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNU6-541P-201ENST00000384709 110 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 DPH3P2-201ENST00000422618 250 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC018865.2-201ENST00000423631 129 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AL139109.1-201ENST00000455491 297 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.631-201ENST00000459607 101 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNA5SP54-201ENST00000516951 92 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 RNU6-58P-201ENST00000517143 103 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 CBX3P7-201ENST00000532876 502 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 MIR4298-201ENST00000584380 73 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC016727.2-201ENST00000603988 621 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 AC091925.1-201ENST00000623204 462 ntBASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDH20Q8N6Y1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.128-201ENST00000363391 112 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.314-201ENST00000365114 102 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 RNU6-474P-201ENST00000384243 107 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 Y_RNA.496-201ENST00000384444 101 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 USP9YP16-201ENST00000430287 407 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 USP9YP23-201ENST00000455085 407 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 AP000870.1-201ENST00000472927 406 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.25□□□□□ -2.05
PCDH20Q8N6Y1 RNU1-41P-201ENST00000516161 162 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms