Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
VPS52Q8N1B4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
VPS52Q8N1B4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
VPS52Q8N1B4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS52Q8N1B4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 SNORA6-201ENST00000384033 151 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 Y_RNA.428-201ENST00000384078 102 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 MIR32-201ENST00000384965 70 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS52Q8N1B4 MIR190B-201ENST00000401119 79 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.57□□□□□ -2
VPS52Q8N1B4 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AC007215.1-201ENST00000464893 276 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AC145146.1-201ENST00000496370 254 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 Y_RNA.706-201ENST00000516933 99 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 Y_RNA.711-201ENST00000516993 102 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 SNORD116.3-201ENST00000517176 78 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AC027288.2-201ENST00000553028 243 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.57□□□□□ -2
VPS52Q8N1B4 MIR3171-201ENST00000584270 74 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 AC087588.2-201ENST00000617667 426 ntBASIC2.57□□□□□ -2
VPS52Q8N1B4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS52Q8N1B4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS52Q8N1B4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS52Q8N1B4 Y_RNA.31-201ENST00000362574 102 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 RNU6-378P-201ENST00000384324 107 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 SNORA46.1-201ENST00000391069 153 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 HMGB3P2-201ENST00000411913 584 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.56□□□□□ -2
VPS52Q8N1B4 AC105758.1-201ENST00000506038 399 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.56□□□□□ -2
VPS52Q8N1B4 RNU7-4P-201ENST00000516961 62 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 MIR1273D-201ENST00000577266 86 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.56□□□□□ -2
VPS52Q8N1B4 AL670379.2-201ENST00000604983 252 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.56□□□□□ -2
VPS52Q8N1B4 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
VPS52Q8N1B4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS52Q8N1B4 Y_RNA.28-201ENST00000362554 111 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 SNORD32B-201ENST00000364460 84 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 Y_RNA.364-201ENST00000365532 101 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 RNY1P14-201ENST00000384426 108 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR625-201ENST00000385047 85 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR208B-201ENST00000401172 77 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AC092423.1-201ENST00000430165 186 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.55□□□□□ -2
VPS52Q8N1B4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS52Q8N1B4 TOMM22P6-201ENST00000465035 409 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AC090515.1-201ENST00000465295 476 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.55□□□□□ -2
VPS52Q8N1B4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VPS52Q8N1B4 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.55□□□□□ -2
VPS52Q8N1B4 RNU6-1198P-201ENST00000516904 67 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AL442663.2-201ENST00000554385 511 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR1244-1-201ENST00000612829 85 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR5739-201ENST00000619803 80 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AC138305.3-201ENST00000624988 240 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR1244-3-201ENST00000635744 85 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR1244-2-201ENST00000636449 85 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 MIR1244-4-202ENST00000636813 85 ntBASIC2.55□□□□□ -2
VPS52Q8N1B4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
VPS52Q8N1B4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.54□□□□□ -2
VPS52Q8N1B4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
VPS52Q8N1B4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS52Q8N1B4 Y_RNA.106-201ENST00000363189 100 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 U3.9-201ENST00000363823 204 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 Y_RNA.319-201ENST00000365138 92 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 RNA5SP213-201ENST00000391031 106 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 RNU1-139P-201ENST00000391307 165 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 MCFD2P1-201ENST00000417812 300 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 MTND4P19-201ENST00000446659 478 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 RN7SKP295-201ENST00000517264 153 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 RNU6-586P-201ENST00000517265 104 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.54□□□□□ -2
VPS52Q8N1B4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.54□□□□□ -2
VPS52Q8N1B4 MIR4769-201ENST00000584126 77 ntBASIC2.54□□□□□ -2
VPS52Q8N1B4 Y_RNA.132-201ENST00000363421 102 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 MIR487A-201ENST00000385009 80 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 AL161788.1-201ENST00000441805 169 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.53□□□□□ -2
VPS52Q8N1B4 CYP2C59P-201ENST00000457790 269 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms