Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNORA71.1-201ENST00000364523 117 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 RNU6-211P-201ENST00000384047 107 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 RNU5E-9P-201ENST00000411164 104 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 ELOCP21-201ENST00000412558 336 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 AC138623.1-201ENST00000418060 216 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 RNA5SP341-201ENST00000516261 117 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 SNORA70.24-201ENST00000517233 118 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 SUMO2P18-201ENST00000518873 252 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 MIR3200-201ENST00000580767 85 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 AC090897.2-201ENST00000581715 130 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 AL356575.1-201ENST00000603008 283 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 AL133393.1-201ENST00000603277 287 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VRK3Q8IV63 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VRK3Q8IV63 AC093831.2-201ENST00000624393 3427 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VRK3Q8IV63 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
VRK3Q8IV63 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
VRK3Q8IV63 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VRK3Q8IV63 AC099654.7-201ENST00000635788 2127 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 RNU4-80P-201ENST00000363200 141 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 RNU6-799P-201ENST00000363567 107 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.92□□□□□ -1.94
VRK3Q8IV63 RNU6-245P-201ENST00000384020 107 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 SNORA9-201ENST00000384215 133 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 RPL39P29-201ENST00000447779 157 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 RNU6-625P-201ENST00000459412 107 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 SNRPGP7-201ENST00000469016 106 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 RNU6-581P-201ENST00000516214 105 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 AC005520.5-201ENST00000613926 164 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 AC004467.1-201ENST00000615678 330 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
VRK3Q8IV63 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VRK3Q8IV63 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.92□□□□□ -1.94
VRK3Q8IV63 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
VRK3Q8IV63 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VRK3Q8IV63 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VRK3Q8IV63 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VRK3Q8IV63 RNU1-62P-201ENST00000362599 164 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 Y_RNA.179-201ENST00000363844 90 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 Y_RNA.272-201ENST00000364696 102 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 RNU4-56P-201ENST00000364700 142 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 RNU6-1027P-201ENST00000383998 107 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 Y_RNA.571-201ENST00000384753 98 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 MIR491-201ENST00000384877 84 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 AL357139.1-201ENST00000407792 426 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 RAB28P5-201ENST00000427490 651 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.91□□□□□ -1.94
VRK3Q8IV63 AL121594.1-201ENST00000475906 575 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 RPS29P20-201ENST00000489592 171 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.91□□□□□ -1.94
VRK3Q8IV63 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.91□□□□□ -1.94
VRK3Q8IV63 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.91□□□□□ -1.94
VRK3Q8IV63 AC004832.5-201ENST00000608677 401 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 AL110115.1-201ENST00000614396 364 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.91□□□□□ -1.94
VRK3Q8IV63 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.91□□□□□ -1.94
VRK3Q8IV63 AC007256.1-201ENST00000392253 2765 ntBASIC2.9□□□□□ -1.94
VRK3Q8IV63 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
VRK3Q8IV63 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
VRK3Q8IV63 RNU6-1272P-201ENST00000362776 107 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 RNU6-312P-201ENST00000364629 107 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 SNORD50B-201ENST00000364995 70 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 RNU6-793P-201ENST00000384233 104 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 Y_RNA.498-201ENST00000384460 102 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 RNU6-1117P-201ENST00000384525 104 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 MIR483-201ENST00000385070 76 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 RNU2-54P-201ENST00000410299 190 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 CYCSP48-201ENST00000417124 323 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.9□□□□□ -1.95
VRK3Q8IV63 AC091179.3-201ENST00000474761 144 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.9□□□□□ -1.95
VRK3Q8IV63 RNU6-928P-201ENST00000516876 104 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 ACA59.2-201ENST00000517061 156 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.9□□□□□ -1.95
VRK3Q8IV63 AP002001.1-203ENST00000534002 267 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 AC006199.1-201ENST00000548728 219 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.9□□□□□ -1.95
VRK3Q8IV63 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.9□□□□□ -1.95
VRK3Q8IV63 MIR4325-201ENST00000583049 90 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 AL008718.3-201ENST00000610217 321 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 AL162274.2-201ENST00000614406 332 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 MTND1P7-201ENST00000632801 297 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VRK3Q8IV63 RBBP8P1-201ENST00000449447 1844 ntBASIC2.9□□□□□ -1.95
VRK3Q8IV63 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms