Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MIR4644-201ENST00000579929 84 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RNF135Q8IUD6 AC006504.1-201ENST00000562493 3666 ntBASIC4.23□□□□□ -1.73
RNF135Q8IUD6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 MIR367-201ENST00000362299 68 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 RNA5SP295-201ENST00000362655 121 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 Y_RNA.229-201ENST00000364347 113 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 Y_RNA.369-201ENST00000365568 117 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 RNU6-144P-201ENST00000383951 107 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 SNORA75.5-201ENST00000391291 81 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 U3.44-201ENST00000458938 192 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 AC090543.2-201ENST00000483963 348 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 MIR4724-201ENST00000579485 89 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 MIR432-201ENST00000606207 94 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 MIR6868-201ENST00000611215 58 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 AC068647.2-201ENST00000637380 353 ntBASIC4.22□□□□□ -1.73
RNF135Q8IUD6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF135Q8IUD6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 RNU1-105P-201ENST00000363470 161 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 SNORD32B-201ENST00000364460 84 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 AL606845.1-201ENST00000404881 255 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 AC006011.1-201ENST00000442758 349 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 RBMY2UP-201ENST00000453474 324 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 AC110741.2-201ENST00000605278 268 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNF135Q8IUD6 MAPK10-372ENST00000641954 3413 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 AL513302.2-201ENST00000562313 1842 ntBASIC4.21□□□□□ -1.74
RNF135Q8IUD6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 SNORD114-7-201ENST00000362520 77 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 SNORA51.4-201ENST00000364993 124 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 RNU6-728P-201ENST00000365375 104 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 RNU6-1228P-201ENST00000391014 107 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 RNA5SP354-201ENST00000391247 136 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 MIR1185-2-201ENST00000408687 86 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 RNU6-1077P-201ENST00000410506 102 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 HSPE1P21-201ENST00000438283 308 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 RPS4XP2-201ENST00000458402 793 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 HMGN2P9-201ENST00000476875 229 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 Y_RNA.757-201ENST00000578934 114 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 MIR3121-201ENST00000579680 77 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 AC012640.5-201ENST00000623897 319 ntBASIC4.2□□□□□ -1.74
RNF135Q8IUD6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF135Q8IUD6 CENPCP1-201ENST00000533085 2578 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 SNORA60-201ENST00000362396 134 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 Y_RNA.495-201ENST00000384435 112 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 MIR1183-201ENST00000408856 89 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF135Q8IUD6 Z98742.2-201ENST00000431564 187 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 RNU5F-4P-201ENST00000516581 114 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 RNU6-1098P-201ENST00000516772 96 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 MIR3922-201ENST00000585192 84 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 AL670379.3-201ENST00000605040 251 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 snoZ196.1-201ENST00000625269 89 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
RNF135Q8IUD6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF135Q8IUD6 AL136164.4-201ENST00000625013 2135 ntBASIC4.19□□□□□ -1.74
RNF135Q8IUD6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF135Q8IUD6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF135Q8IUD6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
RNF135Q8IUD6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms