Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RNU6-823P-201ENST00000391042 103 ntBASIC2.62□□□□□ -1.99
RNF44Q7L0R7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 AC092185.1-201ENST00000491371 97 ntBASIC2.62□□□□□ -1.99
RNF44Q7L0R7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.62□□□□□ -1.99
RNF44Q7L0R7 RNU6-667P-201ENST00000517186 102 ntBASIC2.62□□□□□ -1.99
RNF44Q7L0R7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 RPS29P30-201ENST00000600975 111 ntBASIC2.62□□□□□ -1.99
RNF44Q7L0R7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF44Q7L0R7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
RNF44Q7L0R7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF44Q7L0R7 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.389-201ENST00000383924 113 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 RNU6-611P-201ENST00000384276 104 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 SNORA51.11-201ENST00000384442 131 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.526-201ENST00000384572 110 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.527-201ENST00000384573 102 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 MIR634-201ENST00000385208 97 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 AL033519.2-201ENST00000403958 392 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 SNORD12B-201ENST00000410433 91 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.61□□□□□ -1.99
RNF44Q7L0R7 HMGN2P18-201ENST00000450680 270 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 AC010469.2-201ENST00000496412 480 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.721-201ENST00000517207 102 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 RRN3P3-201ENST00000549207 578 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.61□□□□□ -1.99
RNF44Q7L0R7 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 AC124312.5-201ENST00000604451 268 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.61□□□□□ -1.99
RNF44Q7L0R7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF44Q7L0R7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 RNU6-545P-201ENST00000362681 104 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 SNORA5B-201ENST00000363786 132 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 RNU6-450P-201ENST00000364654 107 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 RNU6-1160P-201ENST00000384546 104 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 RNU6-101P-201ENST00000410323 104 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 IFNA11P-201ENST00000446352 526 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 AC022616.4-201ENST00000522985 181 ntBASIC2.6□□□□□ -1.99
RNF44Q7L0R7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF44Q7L0R7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AC062016.1-201ENST00000355719 319 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 RNU6-859P-201ENST00000362728 107 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 SNORA38-201ENST00000363946 132 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 SNORA63C-201ENST00000364578 129 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 Y_RNA.455-201ENST00000384230 98 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 SNORA67.2-201ENST00000384300 149 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 RNU6-985P-201ENST00000410182 104 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 RNA5SP504-201ENST00000410676 117 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 RNU1-117P-201ENST00000517041 158 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 RNA5SP490-201ENST00000517141 136 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AC034114.1-201ENST00000520293 285 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 MIR4319-201ENST00000577285 85 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 SNORD11B-201ENST00000607707 90 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AL357075.2-201ENST00000614906 189 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 U6.92-201ENST00000636464 89 ntBASIC2.59□□□□□ -1.99
RNF44Q7L0R7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RNF44Q7L0R7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RNF44Q7L0R7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
RNF44Q7L0R7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.59□□□□□ -2
RNF44Q7L0R7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.58□□□□□ -2
RNF44Q7L0R7 Y_RNA.162-201ENST00000363683 102 ntBASIC2.58□□□□□ -2
RNF44Q7L0R7 RNU4-50P-201ENST00000364361 141 ntBASIC2.58□□□□□ -2
RNF44Q7L0R7 SNORD31B-201ENST00000364977 69 ntBASIC2.58□□□□□ -2
RNF44Q7L0R7 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
RNF44Q7L0R7 RNU6-926P-201ENST00000384075 107 ntBASIC2.58□□□□□ -2
RNF44Q7L0R7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms