Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AL030996.1-201ENST00000411430 235 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 HMGN2P38-201ENST00000423806 265 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC096920.1-201ENST00000423991 241 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 HMGN2P3-201ENST00000433603 273 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 HMGN2P5-201ENST00000436882 273 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 RPL23AP3-201ENST00000453844 468 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC112492.4-201ENST00000456549 352 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 RNA5SP57-201ENST00000459463 123 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC007547.1-201ENST00000462177 490 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 HMGN1P13-201ENST00000505795 138 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC092436.3-201ENST00000511788 257 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 RNU1-41P-201ENST00000516161 162 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 RNU1-48P-201ENST00000516400 162 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC020661.2-201ENST00000560114 134 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 MIR3672-201ENST00000584290 82 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AL078605.1-201ENST00000603529 500 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 uc_338.5-201ENST00000611839 155 ntBASIC1.91□□□□□ -2.1
NHLRC1Q6VVB1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NHLRC1Q6VVB1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-1286P-201ENST00000383871 107 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-1227P-201ENST00000383981 107 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.414-201ENST00000384011 101 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-378P-201ENST00000384324 107 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-790P-201ENST00000384479 105 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 SNORA3.2-201ENST00000408221 125 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-325P-201ENST00000411132 105 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AL353705.4-201ENST00000449661 238 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU7-14P-201ENST00000459331 62 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AC091874.1-201ENST00000511402 339 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 MIR449C-201ENST00000516047 92 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-273P-201ENST00000516937 96 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AP003072.1-201ENST00000531740 145 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AL158827.2-201ENST00000602494 330 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 MIR6132-201ENST00000622083 109 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 SNORA43.4-201ENST00000629559 138 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AL691447.3-201ENST00000635020 330 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 MTND4LP32-201ENST00000636111 270 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 AC245060.5-201ENST00000610778 3293 ntBASIC1.9□□□□□ -2.11
NHLRC1Q6VVB1 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.123-201ENST00000363338 102 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-254P-201ENST00000363377 107 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 SNORD31B-201ENST00000364977 69 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.315-201ENST00000365117 102 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 SNORD42.2-201ENST00000365570 69 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-474P-201ENST00000384243 107 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.460-201ENST00000384255 102 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-510P-201ENST00000391239 108 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 MIR300-201ENST00000401138 83 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AL023284.1-201ENST00000403956 276 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 MIR548K-201ENST00000408406 116 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 RPS26P42-201ENST00000413485 326 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 Z98742.3-201ENST00000418637 326 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AL356320.1-201ENST00000429616 163 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC074290.1-201ENST00000448883 135 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC007395.1-201ENST00000451333 677 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 snoU13.15-201ENST00000459407 104 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 SNORD19B-201ENST00000459623 84 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AP005639.2-201ENST00000527592 928 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC087441.2-201ENST00000529141 262 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 FRG2DP-202ENST00000566967 323 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC113139.1-201ENST00000605049 239 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms