Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
PTCH1Q13635 MTND4P14-201ENST00000435799 1354 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTCH1Q13635 RNY3P14-201ENST00000384309 102 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 MIR597-201ENST00000384968 97 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 MT-TL1-201ENST00000386347 75 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PTCH1Q13635 RNU1-139P-201ENST00000391307 165 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 RNU2-3P-201ENST00000410144 191 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 RNU6-373P-201ENST00000411247 98 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AC138393.2-201ENST00000414742 246 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 RPL30P16-201ENST00000419341 429 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AL353572.1-201ENST00000442490 417 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.74□□□□□ -2.13
PTCH1Q13635 MTND4P18-201ENST00000447010 465 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.74□□□□□ -2.13
PTCH1Q13635 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTCH1Q13635 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AL137161.1-201ENST00000532231 390 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AC010525.2-201ENST00000590920 195 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.74□□□□□ -2.13
PTCH1Q13635 AP000654.2-201ENST00000605633 586 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 Z69720.2-201ENST00000624755 279 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.74□□□□□ -2.13
PTCH1Q13635 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCH1Q13635 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PTCH1Q13635 Y_RNA.68-201ENST00000362881 102 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 Y_RNA.324-201ENST00000365165 102 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 RNU6-332P-201ENST00000391193 108 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 AL606923.1-201ENST00000406616 190 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 VN1R36P-201ENST00000414936 291 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCH1Q13635 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCH1Q13635 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 SCARNA18-201ENST00000459004 134 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 LRRC34P2-201ENST00000514850 553 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 RNU5F-2P-201ENST00000516066 82 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.73□□□□□ -2.13
PTCH1Q13635 MTND4P7-201ENST00000523876 130 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 RN7SL793P-201ENST00000583259 296 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 AC060780.3-201ENST00000589464 80 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 RNU6-89P-201ENST00000606519 100 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.73□□□□□ -2.13
PTCH1Q13635 AC097372.5-201ENST00000623665 376 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.73□□□□□ -2.13
PTCH1Q13635 MIR1248-201ENST00000629190 106 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 CASC19-280ENST00000642102 1351 ntBASIC1.73□□□□□ -2.13
PTCH1Q13635 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PTCH1Q13635 Y_RNA.303-201ENST00000364998 94 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 RNU4-66P-201ENST00000365199 138 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 RNU4-20P-201ENST00000365601 151 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 RNU6-1127P-201ENST00000384580 107 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 MIR514A2-201ENST00000385131 88 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 MIR514A3-201ENST00000385132 88 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 CYCSP33-201ENST00000414485 327 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.72□□□□□ -2.13
PTCH1Q13635 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.72□□□□□ -2.13
PTCH1Q13635 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.72□□□□□ -2.13
PTCH1Q13635 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
PTCH1Q13635 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.72□□□□□ -2.13
PTCH1Q13635 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.72□□□□□ -2.13
PTCH1Q13635 MIR548S-201ENST00000581352 82 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 uc_338.34-201ENST00000617467 174 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 AC006504.8-201ENST00000621046 635 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 AC130454.1-201ENST00000622948 401 ntBASIC1.72□□□□□ -2.13
PTCH1Q13635 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.72□□□□□ -2.13
PTCH1Q13635 Y_RNA.157-201ENST00000363638 102 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 RNU6-82P-201ENST00000363970 107 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 Y_RNA.231-201ENST00000364358 102 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTCH1Q13635 Y_RNA.433-201ENST00000384089 102 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 RNU6-393P-201ENST00000384475 107 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 RNU6-160P-201ENST00000384591 107 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 MIR758-201ENST00000390227 88 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 SNORD37.1-201ENST00000390968 65 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 SNORD70.1-201ENST00000391007 85 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 AL357139.1-201ENST00000407792 426 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.71□□□□□ -2.14
PTCH1Q13635 AL669831.1-202ENST00000428504 417 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 ERLEC1P1-201ENST00000433806 578 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 GTF2IP13-201ENST00000438487 386 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 AC023790.1-201ENST00000482174 347 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 AC022447.4-201ENST00000504053 364 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 CCDC34P1-201ENST00000507441 517 ntBASIC1.71□□□□□ -2.14
PTCH1Q13635 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms