Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
LTBQ06643 AC090897.2-201ENST00000581715 130 ntBASIC2.49□□□□□ -2.01
LTBQ06643 MIR3605-201ENST00000583214 100 ntBASIC2.49□□□□□ -2.01
LTBQ06643 AL078605.1-201ENST00000603529 500 ntBASIC2.49□□□□□ -2.01
LTBQ06643 MIR376A1-201ENST00000616574 68 ntBASIC2.49□□□□□ -2.01
LTBQ06643 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.49□□□□□ -2.01
LTBQ06643 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.49□□□□□ -2.01
LTBQ06643 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.49□□□□□ -2.01
LTBQ06643 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.49□□□□□ -2.01
LTBQ06643 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LTBQ06643 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.48□□□□□ -2.01
LTBQ06643 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LTBQ06643 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LTBQ06643 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.48□□□□□ -2.01
LTBQ06643 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
LTBQ06643 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LTBQ06643 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LTBQ06643 MIR26A1-201ENST00000362205 77 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU6-1285P-201ENST00000363480 105 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU6-879P-201ENST00000364328 108 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU1-112P-201ENST00000364401 164 ntBASIC2.48□□□□□ -2.01
LTBQ06643 Y_RNA.237-201ENST00000364439 102 ntBASIC2.48□□□□□ -2.01
LTBQ06643 U8.9-201ENST00000365667 134 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU6-937P-201ENST00000384325 106 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU1-139P-201ENST00000391307 165 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RN7SKP61-201ENST00000410642 295 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU2-49P-201ENST00000410666 184 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AC139712.2-201ENST00000424302 339 ntBASIC2.48□□□□□ -2.01
LTBQ06643 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.48□□□□□ -2.01
LTBQ06643 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RPS15AP5-201ENST00000436276 388 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AC244670.1-201ENST00000436879 112 ntBASIC2.48□□□□□ -2.01
LTBQ06643 IFNA11P-201ENST00000446352 526 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AC090525.1-201ENST00000479116 478 ntBASIC2.48□□□□□ -2.01
LTBQ06643 HMGB1P35-201ENST00000503360 598 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AC016632.1-201ENST00000503994 196 ntBASIC2.48□□□□□ -2.01
LTBQ06643 HMGB3P17-201ENST00000504195 649 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU5F-8P-201ENST00000515941 111 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU6-1023P-201ENST00000516137 106 ntBASIC2.48□□□□□ -2.01
LTBQ06643 Y_RNA.713-201ENST00000517013 96 ntBASIC2.48□□□□□ -2.01
LTBQ06643 RNU6-58P-201ENST00000517143 103 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AC016256.1-201ENST00000547971 354 ntBASIC2.48□□□□□ -2.01
LTBQ06643 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.48□□□□□ -2.01
LTBQ06643 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AC091152.3-201ENST00000604227 325 ntBASIC2.48□□□□□ -2.01
LTBQ06643 Y_RNA.772-201ENST00000606692 102 ntBASIC2.48□□□□□ -2.01
LTBQ06643 AL359198.2-201ENST00000611836 194 ntBASIC2.48□□□□□ -2.01
LTBQ06643 MIR7111-201ENST00000619751 72 ntBASIC2.48□□□□□ -2.01
LTBQ06643 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LTBQ06643 LINC02555-201ENST00000563933 1951 ntBASIC2.48□□□□□ -2.01
LTBQ06643 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.48□□□□□ -2.01
LTBQ06643 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LTBQ06643 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LTBQ06643 Y_RNA.16-201ENST00000362421 102 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RNU1-105P-201ENST00000363470 161 ntBASIC2.47□□□□□ -2.01
LTBQ06643 SNORA20.1-201ENST00000364790 130 ntBASIC2.47□□□□□ -2.01
LTBQ06643 Y_RNA.319-201ENST00000365138 92 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RNU6-281P-201ENST00000384212 103 ntBASIC2.47□□□□□ -2.01
LTBQ06643 Y_RNA.541-201ENST00000384640 113 ntBASIC2.47□□□□□ -2.01
LTBQ06643 Y_RNA.552-201ENST00000384665 112 ntBASIC2.47□□□□□ -2.01
LTBQ06643 MIR10B-201ENST00000385011 110 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RNU6-482P-201ENST00000391068 107 ntBASIC2.47□□□□□ -2.01
LTBQ06643 SNORD78.2-201ENST00000391076 69 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AL512633.1-201ENST00000399931 655 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RNA5SP390-201ENST00000410191 113 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RPS15AP7-201ENST00000439294 405 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC096638.1-201ENST00000444678 216 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC108210.2-201ENST00000503681 201 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.47□□□□□ -2.01
LTBQ06643 RNU6-1114P-201ENST00000516022 107 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RNU6-111P-201ENST00000517179 105 ntBASIC2.47□□□□□ -2.01
LTBQ06643 DEFB108E-201ENST00000524692 240 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC015712.3-201ENST00000559380 164 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.47□□□□□ -2.01
LTBQ06643 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC005296.1-201ENST00000616145 209 ntBASIC2.47□□□□□ -2.01
LTBQ06643 AC110079.1-202ENST00000635213 138 ntBASIC2.47□□□□□ -2.01
LTBQ06643 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LTBQ06643 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LTBQ06643 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.47□□□□□ -2.01
LTBQ06643 HAUS6P2-201ENST00000433254 2404 ntBASIC2.47□□□□□ -2.01
LTBQ06643 RNU6-487P-201ENST00000365430 104 ntBASIC2.46□□□□□ -2.02
LTBQ06643 RNU6-102P-201ENST00000384485 104 ntBASIC2.46□□□□□ -2.02
LTBQ06643 RNU6-541P-201ENST00000384709 110 ntBASIC2.46□□□□□ -2.02
LTBQ06643 RNU6-159P-201ENST00000391080 106 ntBASIC2.46□□□□□ -2.02
LTBQ06643 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LTBQ06643 AL138827.1-201ENST00000402666 306 ntBASIC2.46□□□□□ -2.02
LTBQ06643 SNORD12B-201ENST00000410433 91 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AC009310.1-201ENST00000414414 451 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AC078809.1-201ENST00000427601 140 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AC004383.1-201ENST00000438135 289 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AL603825.1-201ENST00000438481 80 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AC012308.1-201ENST00000451232 178 ntBASIC2.46□□□□□ -2.02
LTBQ06643 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.46□□□□□ -2.02
LTBQ06643 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.46□□□□□ -2.02
LTBQ06643 SNORA31.16-201ENST00000516773 139 ntBASIC2.46□□□□□ -2.02
LTBQ06643 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
LTBQ06643 SNORA31.26-201ENST00000517250 137 ntBASIC2.46□□□□□ -2.02
LTBQ06643 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.46□□□□□ -2.02
LTBQ06643 MIR5695-201ENST00000579717 85 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms