Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.183-201ENST00000363882 113 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 RNU6-770P-201ENST00000363929 105 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 RNU6-245P-201ENST00000384020 107 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.452-201ENST00000384202 108 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 MIR329-1-201ENST00000385028 80 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 MICF-203ENST00000432679 129 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC010095.1-201ENST00000443543 144 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC006483.1-201ENST00000487308 313 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.95□□□□□ -1.94
CDC42EP1Q00587 RPL23AP94-201ENST00000512518 302 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 RNU6-1143P-201ENST00000516125 104 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC026470.2-201ENST00000561492 181 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC023824.2-201ENST00000566185 400 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC105245.1-201ENST00000581934 244 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC010205.1-201ENST00000616668 449 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 U4.1-201ENST00000620349 87 ntBASIC2.95□□□□□ -1.94
CDC42EP1Q00587 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.95□□□□□ -1.94
CDC42EP1Q00587 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDC42EP1Q00587 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.95□□□□□ -1.94
CDC42EP1Q00587 AC080128.1-201ENST00000474389 1917 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.64-201ENST00000362845 102 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.179-201ENST00000363844 90 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 RNU6-806P-201ENST00000365147 105 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDC42EP1Q00587 AL079342.1-201ENST00000401460 267 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.94□□□□□ -1.94
CDC42EP1Q00587 AC027124.2-201ENST00000428249 105 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 RPL23AP58-201ENST00000440453 469 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
CDC42EP1Q00587 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.683-201ENST00000516508 93 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 AC005562.2-201ENST00000618264 111 ntBASIC2.94□□□□□ -1.94
CDC42EP1Q00587 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDC42EP1Q00587 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.26-201ENST00000362539 101 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 RNU1-72P-201ENST00000362976 153 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 RNU6-793P-201ENST00000384233 104 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 RNU6-1145P-201ENST00000384246 107 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 MRPL35P1-201ENST00000404272 572 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 U6atac.2-201ENST00000408644 118 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.595-201ENST00000410403 105 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 MYL12BP1-201ENST00000569826 507 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 AC069294.1-201ENST00000608397 350 ntBASIC2.93□□□□□ -1.94
CDC42EP1Q00587 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.93□□□□□ -1.94
CDC42EP1Q00587 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CDC42EP1Q00587 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.92□□□□□ -1.94
CDC42EP1Q00587 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDC42EP1Q00587 MIR449A-201ENST00000362113 91 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.143-201ENST00000363520 106 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.222-201ENST00000364264 102 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 RNU6-702P-201ENST00000364982 107 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 SNORA18.2-201ENST00000383865 132 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 MIR181A2-201ENST00000384863 110 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.597-201ENST00000410463 100 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 LINC01399-202ENST00000458450 244 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 AC091179.1-201ENST00000461606 579 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.92□□□□□ -1.94
CDC42EP1Q00587 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.92□□□□□ -1.94
CDC42EP1Q00587 AC004817.2-201ENST00000561794 651 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 AL713866.2-201ENST00000603579 219 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 MZT1P2-201ENST00000604387 248 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 MIR376A1-201ENST00000616574 68 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 MIR8062-201ENST00000621515 85 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 MTND5P35-201ENST00000557537 1720 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDC42EP1Q00587 FAM35CP-201ENST00000554755 2470 ntBASIC2.92□□□□□ -1.94
CDC42EP1Q00587 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.105-201ENST00000363182 111 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 RNU6-727P-201ENST00000363592 107 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.193-201ENST00000363979 102 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 Y_RNA.556-201ENST00000384677 113 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 AC004386.2-201ENST00000441858 148 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 AC091179.3-201ENST00000474761 144 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 SNORA40.9-201ENST00000515895 93 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 AP003733.2-201ENST00000529409 171 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 MIR5006-201ENST00000583027 110 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms