Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 U8.22-201ENST00000459141 133 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 HMGB3P3-201ENST00000510526 400 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 AC107222.1-201ENST00000510899 637 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.98□□□□□ -2.09
CX3CL1P78423 RNA5SP320-201ENST00000516263 124 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 RNA5SP82-201ENST00000516707 92 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 RNU7-193P-201ENST00000516723 65 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 RNU6-699P-201ENST00000517081 110 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 AC090617.3-201ENST00000573670 475 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.98□□□□□ -2.09
CX3CL1P78423 MIR6817-201ENST00000615588 66 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 AC087588.2-201ENST00000617667 426 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 U4.3-201ENST00000621047 82 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.98□□□□□ -2.09
CX3CL1P78423 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CX3CL1P78423 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CX3CL1P78423 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.98□□□□□ -2.09
CX3CL1P78423 MTND4P29-201ENST00000503122 1372 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CX3CL1P78423 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CX3CL1P78423 RNU6-545P-201ENST00000362681 104 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 RNA5SP456-201ENST00000364002 114 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 Y_RNA.358-201ENST00000365491 99 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 MIR144-201ENST00000384886 86 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 MIR625-201ENST00000385047 85 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 EIF1P2-201ENST00000428233 350 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.97□□□□□ -2.09
CX3CL1P78423 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.97□□□□□ -2.09
CX3CL1P78423 RNU6-344P-201ENST00000516635 111 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.97□□□□□ -2.09
CX3CL1P78423 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.97□□□□□ -2.09
CX3CL1P78423 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.97□□□□□ -2.09
CX3CL1P78423 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.97□□□□□ -2.09
CX3CL1P78423 MYL12BP1-201ENST00000569826 507 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 AC125232.2-201ENST00000592457 143 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
CX3CL1P78423 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CX3CL1P78423 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CX3CL1P78423 AC073544.1-201ENST00000600110 1595 ntBASIC1.97□□□□□ -2.09
CX3CL1P78423 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
CX3CL1P78423 AC006026.1-201ENST00000444025 1803 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CX3CL1P78423 Y_RNA.431-201ENST00000384086 102 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RNU6-281P-201ENST00000384212 103 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 Y_RNA.557-201ENST00000384680 107 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 HMGN2P39-201ENST00000398005 273 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 MIR1283-1-201ENST00000408494 87 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RNA5SP504-201ENST00000410676 117 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.96□□□□□ -2.1
CX3CL1P78423 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.96□□□□□ -2.1
CX3CL1P78423 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.96□□□□□ -2.1
CX3CL1P78423 AC091179.3-201ENST00000474761 144 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AC027575.1-201ENST00000481064 460 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RNA5SP148-201ENST00000516527 94 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RNU7-4P-201ENST00000516961 62 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RNU1-117P-201ENST00000517041 158 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AC093023.1-201ENST00000547375 507 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 RRN3P3-201ENST00000549207 578 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.96□□□□□ -2.1
CX3CL1P78423 AC005296.1-201ENST00000616145 209 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AL359314.1-201ENST00000616913 261 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AL160413.1-201ENST00000622780 310 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AC008873.1-201ENST00000625051 138 ntBASIC1.96□□□□□ -2.1
CX3CL1P78423 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.96□□□□□ -2.1
CX3CL1P78423 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.95□□□□□ -2.1
CX3CL1P78423 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 RNU1-62P-201ENST00000362599 164 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 RNY3P11-201ENST00000364153 102 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 RNU6-1164P-201ENST00000364428 107 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 RNU6-793P-201ENST00000384233 104 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 Y_RNA.460-201ENST00000384255 102 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 SNORA67.2-201ENST00000384300 149 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 MIR524-201ENST00000385242 87 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 SNORA69.1-201ENST00000390904 137 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 MIR300-201ENST00000401138 83 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 RN7SKP284-201ENST00000411002 343 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 RNU6-1001P-201ENST00000411265 100 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 AC123900.1-201ENST00000420390 96 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.95□□□□□ -2.1
CX3CL1P78423 AC099799.1-201ENST00000439809 192 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 HMGN1P13-201ENST00000505795 138 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
CX3CL1P78423 SNORA31.25-201ENST00000517242 134 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.95□□□□□ -2.1
CX3CL1P78423 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.95□□□□□ -2.1
CX3CL1P78423 AC009127.3-201ENST00000570531 403 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
CX3CL1P78423 AL080274.1-201ENST00000605565 220 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 SNORD11B-201ENST00000607707 90 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 AC090574.1-201ENST00000623186 233 ntBASIC1.95□□□□□ -2.1
CX3CL1P78423 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
CX3CL1P78423 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
CX3CL1P78423 RNA5SP361-201ENST00000362686 118 ntBASIC1.94□□□□□ -2.1
CX3CL1P78423 RNU6-727P-201ENST00000363592 107 ntBASIC1.94□□□□□ -2.1
CX3CL1P78423 RNU5F-3P-201ENST00000363767 117 ntBASIC1.94□□□□□ -2.1
CX3CL1P78423 Y_RNA.314-201ENST00000365114 102 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms