Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
RAE1P78406 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.55□□□□□ -2
RAE1P78406 RNU6-770P-201ENST00000363929 105 ntBASIC2.55□□□□□ -2
RAE1P78406 RNA5SP387-201ENST00000364226 106 ntBASIC2.55□□□□□ -2
RAE1P78406 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RAE1P78406 RNU6-713P-201ENST00000384761 107 ntBASIC2.55□□□□□ -2
RAE1P78406 MIR128-1-201ENST00000384921 82 ntBASIC2.55□□□□□ -2
RAE1P78406 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
RAE1P78406 SNORA48.2-201ENST00000390926 124 ntBASIC2.55□□□□□ -2
RAE1P78406 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
RAE1P78406 FO393413.1-201ENST00000402892 195 ntBASIC2.55□□□□□ -2
RAE1P78406 Y_RNA.595-201ENST00000410403 105 ntBASIC2.55□□□□□ -2
RAE1P78406 AC004866.1-201ENST00000411748 78 ntBASIC2.55□□□□□ -2
RAE1P78406 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.55□□□□□ -2
RAE1P78406 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
RAE1P78406 CBX3P6-201ENST00000430257 527 ntBASIC2.55□□□□□ -2
RAE1P78406 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
RAE1P78406 AC004386.2-201ENST00000441858 148 ntBASIC2.55□□□□□ -2
RAE1P78406 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
RAE1P78406 IFNA11P-201ENST00000446352 526 ntBASIC2.55□□□□□ -2
RAE1P78406 RPL26P26-201ENST00000480251 434 ntBASIC2.55□□□□□ -2
RAE1P78406 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.55□□□□□ -2
RAE1P78406 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.55□□□□□ -2
RAE1P78406 AC025465.3-201ENST00000510570 311 ntBASIC2.55□□□□□ -2
RAE1P78406 SNORA40.9-201ENST00000515895 93 ntBASIC2.55□□□□□ -2
RAE1P78406 MTND5P35-201ENST00000557537 1720 ntBASIC2.55□□□□□ -2
RAE1P78406 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.55□□□□□ -2
RAE1P78406 MIR5739-201ENST00000619803 80 ntBASIC2.55□□□□□ -2
RAE1P78406 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.55□□□□□ -2
RAE1P78406 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAE1P78406 RNU6-944P-201ENST00000364023 107 ntBASIC2.54□□□□□ -2
RAE1P78406 RNU6-26P-201ENST00000383985 107 ntBASIC2.54□□□□□ -2
RAE1P78406 RNU6-926P-201ENST00000384075 107 ntBASIC2.54□□□□□ -2
RAE1P78406 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
RAE1P78406 AC010095.1-201ENST00000443543 144 ntBASIC2.54□□□□□ -2
RAE1P78406 EEF1B2P7-201ENST00000451177 676 ntBASIC2.54□□□□□ -2
RAE1P78406 CYP2C59P-201ENST00000457790 269 ntBASIC2.54□□□□□ -2
RAE1P78406 SNORA70.24-201ENST00000517233 118 ntBASIC2.54□□□□□ -2
RAE1P78406 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
RAE1P78406 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
RAE1P78406 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
RAE1P78406 MZT1P2-201ENST00000604387 248 ntBASIC2.54□□□□□ -2
RAE1P78406 AL357075.2-201ENST00000614906 189 ntBASIC2.54□□□□□ -2
RAE1P78406 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAE1P78406 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.53□□□□□ -2
RAE1P78406 Y_RNA.19-201ENST00000362462 99 ntBASIC2.53□□□□□ -2
RAE1P78406 RNU6-238P-201ENST00000363313 106 ntBASIC2.53□□□□□ -2
RAE1P78406 SNORD56.5-201ENST00000364281 72 ntBASIC2.53□□□□□ -2
RAE1P78406 Y_RNA.452-201ENST00000384202 108 ntBASIC2.53□□□□□ -2
RAE1P78406 SNORA9-201ENST00000384215 133 ntBASIC2.53□□□□□ -2
RAE1P78406 DYNLT3P2-201ENST00000442517 295 ntBASIC2.53□□□□□ -2
RAE1P78406 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.53□□□□□ -2
RAE1P78406 AC090515.1-201ENST00000465295 476 ntBASIC2.53□□□□□ -2
RAE1P78406 AC074133.1-201ENST00000515696 183 ntBASIC2.53□□□□□ -2
RAE1P78406 RNY3P15-201ENST00000516297 97 ntBASIC2.53□□□□□ -2
RAE1P78406 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
RAE1P78406 AL161670.1-201ENST00000554348 137 ntBASIC2.53□□□□□ -2
RAE1P78406 AC233702.2-202ENST00000562547 291 ntBASIC2.53□□□□□ -2
RAE1P78406 AC023824.2-201ENST00000566185 400 ntBASIC2.53□□□□□ -2
RAE1P78406 MIR4503-201ENST00000582187 83 ntBASIC2.53□□□□□ -2
RAE1P78406 MIR5006-201ENST00000583027 110 ntBASIC2.53□□□□□ -2
RAE1P78406 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
RAE1P78406 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
RAE1P78406 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RAE1P78406 Y_RNA.333-201ENST00000365274 102 ntBASIC2.52□□□□□ -2.01
RAE1P78406 RNA5SP240-201ENST00000365355 128 ntBASIC2.52□□□□□ -2.01
RAE1P78406 Y_RNA.556-201ENST00000384677 113 ntBASIC2.52□□□□□ -2.01
RAE1P78406 MIR627-201ENST00000384979 97 ntBASIC2.52□□□□□ -2.01
RAE1P78406 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RAE1P78406 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
RAE1P78406 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.52□□□□□ -2.01
RAE1P78406 AL161788.1-201ENST00000441805 169 ntBASIC2.52□□□□□ -2.01
RAE1P78406 UQCRBP2-201ENST00000447827 297 ntBASIC2.52□□□□□ -2.01
RAE1P78406 PCNPP5-201ENST00000452246 481 ntBASIC2.52□□□□□ -2.01
RAE1P78406 snoU13.22-201ENST00000459428 104 ntBASIC2.52□□□□□ -2.01
RAE1P78406 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.52□□□□□ -2.01
RAE1P78406 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.52□□□□□ -2.01
RAE1P78406 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
RAE1P78406 RNU2-44P-201ENST00000516795 194 ntBASIC2.52□□□□□ -2.01
RAE1P78406 SNORA48.11-201ENST00000517015 89 ntBASIC2.52□□□□□ -2.01
RAE1P78406 AC004817.2-201ENST00000561794 651 ntBASIC2.52□□□□□ -2.01
RAE1P78406 AC136932.1-201ENST00000574771 208 ntBASIC2.52□□□□□ -2.01
RAE1P78406 MIR3200-201ENST00000580767 85 ntBASIC2.52□□□□□ -2.01
RAE1P78406 MIR3117-201ENST00000584034 78 ntBASIC2.52□□□□□ -2.01
RAE1P78406 MIR3149-201ENST00000584629 83 ntBASIC2.52□□□□□ -2.01
RAE1P78406 SNORD11B-201ENST00000607707 90 ntBASIC2.52□□□□□ -2.01
RAE1P78406 U4.1-201ENST00000620349 87 ntBASIC2.52□□□□□ -2.01
RAE1P78406 MIR8062-201ENST00000621515 85 ntBASIC2.52□□□□□ -2.01
RAE1P78406 AC008873.1-201ENST00000625051 138 ntBASIC2.52□□□□□ -2.01
RAE1P78406 AL137790.1-201ENST00000634283 177 ntBASIC2.52□□□□□ -2.01
RAE1P78406 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.52□□□□□ -2.01
RAE1P78406 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAE1P78406 LINC02555-201ENST00000563933 1951 ntBASIC2.51□□□□□ -2.01
RAE1P78406 Y_RNA.105-201ENST00000363182 111 ntBASIC2.51□□□□□ -2.01
RAE1P78406 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
RAE1P78406 MIR491-201ENST00000384877 84 ntBASIC2.51□□□□□ -2.01
RAE1P78406 MIR592-201ENST00000384959 97 ntBASIC2.51□□□□□ -2.01
RAE1P78406 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AL031121.1-201ENST00000406553 254 ntBASIC2.51□□□□□ -2.01
RAE1P78406 RNU6-121P-201ENST00000410525 99 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms