Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RNU6-23P-201ENST00000363283 107 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 RNA5SP493-201ENST00000364115 91 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 U3.40-201ENST00000408706 208 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 RNU6-370P-201ENST00000411008 104 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PRAMEP78395 AC096920.1-201ENST00000423991 241 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 RN7SKP210-201ENST00000459176 261 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 AC091951.2-201ENST00000500762 203 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 RRN3P3-201ENST00000549207 578 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.15□□□□□ -2.07
PRAMEP78395 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.15□□□□□ -2.07
PRAMEP78395 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.15□□□□□ -2.07
PRAMEP78395 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 AL355802.3-201ENST00000607571 545 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 LINC02555-201ENST00000563933 1951 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 MTND5P6-201ENST00000422338 1798 ntBASIC2.15□□□□□ -2.07
PRAMEP78395 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.15□□□□□ -2.07
PRAMEP78395 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PRAMEP78395 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PRAMEP78395 MIR340-201ENST00000362125 95 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 Y_RNA.132-201ENST00000363421 102 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 RNU6-418P-201ENST00000384035 107 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 RNU6-17P-201ENST00000384245 107 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 RNU6-18P-201ENST00000384527 107 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PRAMEP78395 MIR320B2-201ENST00000408479 138 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PRAMEP78395 SNORA25.14-201ENST00000516481 132 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 SCARNA16.2-201ENST00000516520 172 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 RNA5SP54-201ENST00000516951 92 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 AC027288.2-201ENST00000553028 243 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 AL669831.3-213ENST00000636676 183 ntBASIC2.14□□□□□ -2.07
PRAMEP78395 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.14□□□□□ -2.07
PRAMEP78395 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRAMEP78395 Y_RNA.474-201ENST00000384341 102 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.13□□□□□ -2.07
PRAMEP78395 USMG5P1-201ENST00000425964 177 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.13□□□□□ -2.07
PRAMEP78395 MTND4P18-201ENST00000447010 465 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 AC009237.7-201ENST00000447357 229 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 AC016925.1-201ENST00000458303 298 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 RNU6-507P-201ENST00000516045 100 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 RNU6-1198P-201ENST00000516904 67 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 RNU1-117P-201ENST00000517041 158 ntBASIC2.13□□□□□ -2.07
PRAMEP78395 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.13□□□□□ -2.07
PRAMEP78395 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PRAMEP78395 MIR449A-201ENST00000362113 91 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 RNY1P16-201ENST00000363063 111 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 RNU6-873P-201ENST00000363833 107 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 RNU6-1305P-201ENST00000364353 104 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 XGY1-201ENST00000381172 446 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 RNY3P14-201ENST00000384309 102 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 Y_RNA.500-201ENST00000384466 111 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 MIR1283-1-201ENST00000408494 87 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AL135786.1-201ENST00000415892 214 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 NCOR1P3-201ENST00000420479 303 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
PRAMEP78395 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.12□□□□□ -2.07
PRAMEP78395 AP000870.1-201ENST00000472927 406 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 UBE2DNL-203ENST00000474922 222 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.12□□□□□ -2.07
PRAMEP78395 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.12□□□□□ -2.07
PRAMEP78395 RNU6-559P-201ENST00000516151 98 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 Y_RNA.706-201ENST00000516933 99 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AC087441.2-201ENST00000529141 262 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AC104581.2-201ENST00000572227 430 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 MIR4287-201ENST00000579398 78 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 MIR4753-201ENST00000585119 83 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 AL162373.1-201ENST00000620433 407 ntBASIC2.12□□□□□ -2.07
PRAMEP78395 RNU6-222P-201ENST00000362438 107 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 Y_RNA.106-201ENST00000363189 100 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 Y_RNA.490-201ENST00000384413 102 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 MIR300-201ENST00000401138 83 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 MTND3P23-201ENST00000431980 347 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 AC016717.1-201ENST00000448918 286 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 AC007395.1-201ENST00000451333 677 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 AC010531.2-201ENST00000465012 153 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.11□□□□□ -2.07
PRAMEP78395 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
PRAMEP78395 RNU6-120P-201ENST00000516077 103 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 RNU6-875P-201ENST00000516488 106 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 AC134698.4-201ENST00000523451 826 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.11□□□□□ -2.07
PRAMEP78395 APOOP3-201ENST00000536787 586 ntBASIC2.11□□□□□ -2.07
PRAMEP78395 MIR3169-201ENST00000578032 83 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms