Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HERVK_113P62684 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HERVK_113P62684 Y_RNA.40-201ENST00000362645 93 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 RNU6-961P-201ENST00000363893 105 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 Y_RNA.286-201ENST00000364813 102 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 Y_RNA.539-201ENST00000384635 107 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 MIR767-201ENST00000390228 109 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 AL033519.2-201ENST00000403958 392 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 RNA5SP274-201ENST00000410484 108 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 RNU5A-5P-201ENST00000411054 116 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 AC112220.1-201ENST00000434628 355 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.3□□□□□ -1.88
HERVK_113P62684 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.3□□□□□ -1.88
HERVK_113P62684 HSPE1P25-201ENST00000455484 251 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 AC112771.1-201ENST00000463581 102 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 RPL26P26-201ENST00000480251 434 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.3□□□□□ -1.88
HERVK_113P62684 SEPT14P8-201ENST00000508026 178 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 AL391813.1-201ENST00000603098 260 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 SNORD113-5-201ENST00000607261 78 ntBASIC3.3□□□□□ -1.88
HERVK_113P62684 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
HERVK_113P62684 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HERVK_113P62684 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.3□□□□□ -1.88
HERVK_113P62684 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HERVK_113P62684 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HERVK_113P62684 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.3□□□□□ -1.88
HERVK_113P62684 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HERVK_113P62684 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
HERVK_113P62684 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HERVK_113P62684 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HERVK_113P62684 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HERVK_113P62684 RNU5F-3P-201ENST00000363767 117 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 Y_RNA.179-201ENST00000363844 90 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 Y_RNA.462-201ENST00000384268 102 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 MIR196B-201ENST00000384852 84 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 CBX3P9-201ENST00000402326 552 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 CYCSP48-201ENST00000417124 323 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 OOSP1P1-201ENST00000423265 274 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.29□□□□□ -1.88
HERVK_113P62684 AC073901.1-201ENST00000462471 408 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 RPS23P5-201ENST00000495419 428 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.29□□□□□ -1.88
HERVK_113P62684 RRN3P3-201ENST00000549207 578 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 AL357075.2-201ENST00000614906 189 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.29□□□□□ -1.88
HERVK_113P62684 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.29□□□□□ -1.88
HERVK_113P62684 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HERVK_113P62684 RNU6-1010P-201ENST00000362757 107 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 CD24P4-201ENST00000382840 243 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 SNORA53-201ENST00000391141 249 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.28□□□□□ -1.88
HERVK_113P62684 UQCRBP2-201ENST00000447827 297 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 SERF1AP1-201ENST00000514575 187 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 RNU6-138P-201ENST00000515952 107 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 Y_RNA.683-201ENST00000516508 93 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.28□□□□□ -1.88
HERVK_113P62684 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 MZT1P2-201ENST00000604387 248 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 AC037487.3-201ENST00000606668 112 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 BX284668.6-201ENST00000606899 438 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
HERVK_113P62684 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.28□□□□□ -1.88
HERVK_113P62684 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.28□□□□□ -1.88
HERVK_113P62684 AC135776.4-201ENST00000624300 1904 ntBASIC3.28□□□□□ -1.88
HERVK_113P62684 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HERVK_113P62684 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
HERVK_113P62684 MTND5P35-201ENST00000557537 1720 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HERVK_113P62684 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HERVK_113P62684 RNU6-799P-201ENST00000363567 107 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 RNU6-727P-201ENST00000363592 107 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 RNU6-1175P-201ENST00000365200 107 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 RNU6-378P-201ENST00000384324 107 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 MIR320B2-201ENST00000408479 138 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.27□□□□□ -1.89
HERVK_113P62684 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 AC103975.1-201ENST00000482506 483 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 RPL36AP48-201ENST00000485521 314 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 RN7SL633P-201ENST00000488974 297 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.27□□□□□ -1.89
HERVK_113P62684 AC005176.2-201ENST00000596933 147 ntBASIC3.27□□□□□ -1.89
HERVK_113P62684 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.27□□□□□ -1.89
HERVK_113P62684 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
HERVK_113P62684 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.27□□□□□ -1.89
HERVK_113P62684 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HERVK_113P62684 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERVK_113P62684 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HERVK_113P62684 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.26□□□□□ -1.89
HERVK_113P62684 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERVK_113P62684 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HERVK_113P62684 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 RNU1-105P-201ENST00000363470 161 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 RNU1-112P-201ENST00000364401 164 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 RNU6-200P-201ENST00000364743 107 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 SNORA72.2-201ENST00000365028 127 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 RNU6-793P-201ENST00000384233 104 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms