Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL606662.1-201ENST00000445763 553 ntBASIC0.32□□□□□ -2.36
CDC42P60953 RPL39P39-201ENST00000455840 151 ntBASIC0.32□□□□□ -2.36
CDC42P60953 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42P60953 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
CDC42P60953 AC022616.3-201ENST00000523940 148 ntBASIC0.32□□□□□ -2.36
CDC42P60953 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42P60953 AC146944.4-201ENST00000602697 718 ntBASIC0.32□□□□□ -2.36
CDC42P60953 AL357312.1-201ENST00000603879 298 ntBASIC0.32□□□□□ -2.36
CDC42P60953 AC073349.3-201ENST00000617616 186 ntBASIC0.32□□□□□ -2.36
CDC42P60953 U6.108-201ENST00000637764 58 ntBASIC0.32□□□□□ -2.36
CDC42P60953 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CDC42P60953 AL356583.2-201ENST00000426536 280 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC084290.1-201ENST00000434995 374 ntBASIC0.31□□□□□ -2.36
CDC42P60953 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42P60953 NFU1P2-201ENST00000448700 469 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC074290.1-201ENST00000448883 135 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AL031274.1-201ENST00000450334 232 ntBASIC0.31□□□□□ -2.36
CDC42P60953 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42P60953 AC079140.5-201ENST00000507882 310 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC103996.1-201ENST00000555468 102 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC026470.2-201ENST00000561492 181 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42P60953 AL162424.1-201ENST00000602325 221 ntBASIC0.31□□□□□ -2.36
CDC42P60953 Z83818.1-201ENST00000603584 150 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
CDC42P60953 PRELID3BP2-201ENST00000605362 201 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AL359075.3-201ENST00000613288 217 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
CDC42P60953 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC009878.1-201ENST00000621819 340 ntBASIC0.31□□□□□ -2.36
CDC42P60953 AC011155.2-201ENST00000623202 216 ntBASIC0.31□□□□□ -2.36
CDC42P60953 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
CDC42P60953 U6.114-201ENST00000636407 96 ntBASIC0.31□□□□□ -2.36
CDC42P60953 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CDC42P60953 RNU6-1287P-201ENST00000362914 107 ntBASIC0.3□□□□□ -2.36
CDC42P60953 RNU6-199P-201ENST00000362954 107 ntBASIC0.3□□□□□ -2.36
CDC42P60953 RNU1-133P-201ENST00000364867 167 ntBASIC0.3□□□□□ -2.36
CDC42P60953 RNU6-827P-201ENST00000365553 106 ntBASIC0.3□□□□□ -2.36
CDC42P60953 RNU6-1060P-201ENST00000384664 107 ntBASIC0.3□□□□□ -2.36
CDC42P60953 MRPL42P3-201ENST00000401492 326 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AL451046.2-201ENST00000403074 277 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AL355796.1-201ENST00000406706 323 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42P60953 CDK8P2-201ENST00000415020 547 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AC004386.2-201ENST00000441858 148 ntBASIC0.3□□□□□ -2.36
CDC42P60953 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42P60953 SNRPGP9-201ENST00000456025 225 ntBASIC0.3□□□□□ -2.36
CDC42P60953 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42P60953 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42P60953 SCARNA24.1-201ENST00000516465 137 ntBASIC0.3□□□□□ -2.36
CDC42P60953 MIR5006-201ENST00000583027 110 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AL078603.1-201ENST00000603824 313 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AC138749.5-201ENST00000611461 208 ntBASIC0.3□□□□□ -2.36
CDC42P60953 TCL6_2.1-201ENST00000615162 119 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
CDC42P60953 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.3□□□□□ -2.36
CDC42P60953 AC027514.1-201ENST00000588561 1603 ntBASIC0.3□□□□□ -2.36
CDC42P60953 MTND4P5-201ENST00000435821 1374 ntBASIC0.3□□□□□ -2.36
CDC42P60953 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CDC42P60953 RNU4-48P-201ENST00000365559 182 ntBASIC0.29□□□□□ -2.36
CDC42P60953 SNORA20.2-201ENST00000383922 131 ntBASIC0.29□□□□□ -2.36
CDC42P60953 RNU6-945P-201ENST00000383947 107 ntBASIC0.29□□□□□ -2.36
CDC42P60953 SNORD116-13-201ENST00000384408 92 ntBASIC0.29□□□□□ -2.36
CDC42P60953 RNU6-83P-201ENST00000384568 112 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AL031577.2-201ENST00000404133 280 ntBASIC0.29□□□□□ -2.36
CDC42P60953 RNA5SP247-201ENST00000411181 105 ntBASIC0.29□□□□□ -2.36
CDC42P60953 MTCO2P23-201ENST00000425216 680 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AC245047.3-201ENST00000429428 127 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42P60953 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.29□□□□□ -2.36
CDC42P60953 AC022364.2-201ENST00000457963 554 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AL049830.1-201ENST00000468034 425 ntBASIC0.29□□□□□ -2.36
CDC42P60953 RNU6-496P-201ENST00000516145 99 ntBASIC0.29□□□□□ -2.36
CDC42P60953 Y_RNA.672-201ENST00000516289 104 ntBASIC0.29□□□□□ -2.36
CDC42P60953 RNA5SP220-201ENST00000516298 104 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AC016256.1-201ENST00000547971 354 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AC004584.2-201ENST00000570407 410 ntBASIC0.29□□□□□ -2.36
CDC42P60953 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
CDC42P60953 MIR586-201ENST00000385035 97 ntBASIC0.28□□□□□ -2.36
CDC42P60953 SNORA12.1-201ENST00000390873 148 ntBASIC0.28□□□□□ -2.36
CDC42P60953 MTND3P17-201ENST00000416968 344 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC092423.1-201ENST00000430165 186 ntBASIC0.28□□□□□ -2.36
CDC42P60953 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42P60953 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42P60953 AC009237.7-201ENST00000447357 229 ntBASIC0.28□□□□□ -2.36
CDC42P60953 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42P60953 MTCO2P6-201ENST00000463134 685 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42P60953 SNORA70.12-201ENST00000516084 153 ntBASIC0.28□□□□□ -2.36
CDC42P60953 Y_RNA.676-201ENST00000516393 96 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDC42P60953 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42P60953 PCMTD1P2-201ENST00000565017 355 ntBASIC0.28□□□□□ -2.36
CDC42P60953 MIR4778-201ENST00000577635 80 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC025627.3-201ENST00000582078 182 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC097065.2-201ENST00000608159 533 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AL360219.1-201ENST00000610230 366 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC009159.2-201ENST00000617603 606 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms