Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL035461.1-201ENST00000421490 332 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.54□□□□□ -1.84
ERVFC1P60507 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.54□□□□□ -1.84
ERVFC1P60507 HMGN2P10-201ENST00000448085 265 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 RNA5SP272-201ENST00000516095 111 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 RN7SKP83-201ENST00000516512 178 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 RNU6-919P-201ENST00000516731 104 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 AC136628.3-201ENST00000521868 290 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.54□□□□□ -1.84
ERVFC1P60507 MIR5047-201ENST00000579212 100 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 AC090616.3-201ENST00000582184 217 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 AC006380.1-201ENST00000603598 186 ntBASIC3.54□□□□□ -1.84
ERVFC1P60507 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1P60507 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1P60507 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.53□□□□□ -1.84
ERVFC1P60507 RNU6-801P-201ENST00000364087 105 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 SNORD116-14-201ENST00000383894 92 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 SNORD116-17-201ENST00000383929 92 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 SNORD116-15-201ENST00000384445 92 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 SNORD116-19-201ENST00000384729 92 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 MIR320B2-201ENST00000408479 138 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 CYCSP48-201ENST00000417124 323 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.53□□□□□ -1.84
ERVFC1P60507 HMGN2P20-201ENST00000437531 273 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 U8.19-201ENST00000459095 133 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.53□□□□□ -1.84
ERVFC1P60507 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.53□□□□□ -1.84
ERVFC1P60507 SNORA31.16-201ENST00000516773 139 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.53□□□□□ -1.84
ERVFC1P60507 MIR3136-201ENST00000583498 78 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 DNAJC19P2-201ENST00000593340 302 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 AL359881.1-201ENST00000602916 267 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 AC244205.2-202ENST00000635781 342 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ERVFC1P60507 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ERVFC1P60507 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ERVFC1P60507 AL136164.4-201ENST00000625013 2135 ntBASIC3.53□□□□□ -1.84
ERVFC1P60507 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ERVFC1P60507 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.53□□□□□ -1.84
ERVFC1P60507 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.53□□□□□ -1.85
ERVFC1P60507 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.53□□□□□ -1.85
ERVFC1P60507 AC068647.1-201ENST00000489539 2265 ntBASIC3.53□□□□□ -1.85
ERVFC1P60507 AC002546.1-201ENST00000588041 2504 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ERVFC1P60507 AC006504.1-201ENST00000562493 3666 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ERVFC1P60507 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.52□□□□□ -1.85
ERVFC1P60507 RNU6-834P-201ENST00000362367 110 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 Y_RNA.71-201ENST00000362892 104 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 MIR539-201ENST00000365690 78 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ERVFC1P60507 RNU6-1264P-201ENST00000383891 107 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 SNORA18.3-201ENST00000384122 132 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 SNORA44-201ENST00000384584 132 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 MIR626-201ENST00000385032 94 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 U3.40-201ENST00000408706 208 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 AC019205.3-201ENST00000424573 156 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 ARF4P2-201ENST00000430209 526 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 RPL23AP58-201ENST00000440453 469 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 AC107027.2-201ENST00000512197 115 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 AC021269.2-201ENST00000532318 330 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 AC022616.8-201ENST00000533569 253 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 HIGD1AP1-201ENST00000550979 275 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 MIR4474-201ENST00000579189 78 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 SNRPGP20-201ENST00000604477 205 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.52□□□□□ -1.85
ERVFC1P60507 AC013791.1-201ENST00000616619 62 ntBASIC3.52□□□□□ -1.85
ERVFC1P60507 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
ERVFC1P60507 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.52□□□□□ -1.85
ERVFC1P60507 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.52□□□□□ -1.85
ERVFC1P60507 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ERVFC1P60507 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ERVFC1P60507 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
ERVFC1P60507 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.51□□□□□ -1.85
ERVFC1P60507 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.51□□□□□ -1.85
ERVFC1P60507 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 AC002543.1-201ENST00000299783 1954 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1P60507 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.51□□□□□ -1.85
ERVFC1P60507 RNU6-44P-201ENST00000384045 107 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 HMGN2P8-201ENST00000391458 268 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 MIR513C-201ENST00000401352 84 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.51□□□□□ -1.85
ERVFC1P60507 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 AC025750.2-201ENST00000442609 450 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 RN7SL93P-201ENST00000463035 293 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 RN7SL330P-201ENST00000469709 307 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 AC090525.1-201ENST00000479116 478 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 RPS27P26-201ENST00000494583 239 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 RNU6-1333P-201ENST00000516162 93 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 RNU6-971P-201ENST00000516920 106 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 DEFB131C-201ENST00000528817 165 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 AC021739.1-201ENST00000559631 174 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.51□□□□□ -1.85
ERVFC1P60507 RNVU1-4-201ENST00000612985 164 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
ERVFC1P60507 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1P60507 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms