Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC087588.2-201ENST00000617667 426 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 MTND5P16-201ENST00000460269 1703 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 ZNF204P-201ENST00000416749 2397 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 RNU6-222P-201ENST00000362438 107 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 Y_RNA.138-201ENST00000363462 102 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 SNORA38-201ENST00000363946 132 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 RNU6-280P-201ENST00000364145 104 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 RNU1-115P-201ENST00000365329 160 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 Y_RNA.496-201ENST00000384444 101 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC027124.2-201ENST00000428249 105 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC009238.1-201ENST00000442165 424 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC007677.1-201ENST00000445757 515 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC009237.6-201ENST00000446969 424 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 RN7SL636P-201ENST00000497504 294 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC234781.5-201ENST00000508429 271 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 RNU6-965P-201ENST00000516721 96 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 RNU1-104P-201ENST00000517280 175 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 AC091144.1-201ENST00000519573 138 ntBASIC2.18□□□□□ -2.06
CLDN20P56880 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN20P56880 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CLDN20P56880 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CLDN20P56880 RNU1-76P-201ENST00000362903 159 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 Y_RNA.358-201ENST00000365491 99 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 SNORA25B-201ENST00000365507 128 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 SNORA18.2-201ENST00000383865 132 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 RNU6-474P-201ENST00000384243 107 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 MIR10B-201ENST00000385011 110 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 MIR1302-11-201ENST00000408051 138 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 MIR548P-201ENST00000408336 84 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 MIR1302-9-201ENST00000408365 138 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 MIR1302-10-201ENST00000408734 138 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 Y_RNA.592-201ENST00000410274 109 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 AC007064.1-201ENST00000412238 351 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 WARS2P1-201ENST00000429678 537 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 AC107032.1-201ENST00000485945 480 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN20P56880 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN20P56880 MIR2355-201ENST00000517199 87 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 IGLV3-17-201ENST00000519099 244 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN20P56880 UBL5P4-201ENST00000562584 236 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN20P56880 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN20P56880 SNRPGP17-201ENST00000603780 214 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 MIR1302-2-201ENST00000607096 138 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
CLDN20P56880 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.17□□□□□ -2.06
CLDN20P56880 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN20P56880 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN20P56880 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN20P56880 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CLDN20P56880 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN20P56880 RNU6-873P-201ENST00000363833 107 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU4-42P-201ENST00000364738 142 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU6-611P-201ENST00000384276 104 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 Y_RNA.557-201ENST00000384680 107 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 MIR549A-201ENST00000385268 96 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNA5SP213-201ENST00000391031 106 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC114482.1-201ENST00000418010 247 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 EIF1P2-201ENST00000428233 350 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC004386.2-201ENST00000441858 148 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC096638.1-201ENST00000444678 216 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 MTCO3P8-201ENST00000453691 755 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RPS23P5-201ENST00000495419 428 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN20P56880 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN20P56880 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN20P56880 MIR449C-201ENST00000516047 92 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 SNORA25.14-201ENST00000516481 132 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU6-911P-201ENST00000516523 104 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU5F-4P-201ENST00000516581 114 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU6-1098P-201ENST00000516772 96 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 RNU2-44P-201ENST00000516795 194 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 DEFB131C-201ENST00000528817 165 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC023442.1-201ENST00000531247 422 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 MIR5006-201ENST00000583027 110 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 MIR4658-201ENST00000584344 65 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC092447.9-201ENST00000603395 144 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AL132822.1-201ENST00000617063 513 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 AC138305.3-201ENST00000624988 240 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN20P56880 MIR1248-201ENST00000629190 106 ntBASIC2.16□□□□□ -2.06
CLDN20P56880 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN20P56880 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CLDN20P56880 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CLDN20P56880 Y_RNA.39-201ENST00000362620 98 ntBASIC2.15□□□□□ -2.07
CLDN20P56880 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
CLDN20P56880 RNU6-1227P-201ENST00000383981 107 ntBASIC2.15□□□□□ -2.07
CLDN20P56880 RNY1P14-201ENST00000384426 108 ntBASIC2.15□□□□□ -2.07
CLDN20P56880 Y_RNA.605-201ENST00000410577 105 ntBASIC2.15□□□□□ -2.07
CLDN20P56880 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN20P56880 MTCYBP6-201ENST00000441810 138 ntBASIC2.15□□□□□ -2.07
CLDN20P56880 AC009237.7-201ENST00000447357 229 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms