Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
COPB1P53618 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.75□□□□□ -1.97
COPB1P53618 AC067942.3-201ENST00000512025 362 ntBASIC2.75□□□□□ -1.97
COPB1P53618 RNU6-1012P-201ENST00000516606 109 ntBASIC2.75□□□□□ -1.97
COPB1P53618 AC022868.1-201ENST00000517767 391 ntBASIC2.75□□□□□ -1.97
COPB1P53618 MIR3671-201ENST00000580455 88 ntBASIC2.75□□□□□ -1.97
COPB1P53618 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
COPB1P53618 MIR8062-201ENST00000621515 85 ntBASIC2.75□□□□□ -1.97
COPB1P53618 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.75□□□□□ -1.97
COPB1P53618 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
COPB1P53618 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
COPB1P53618 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.75□□□□□ -1.97
COPB1P53618 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COPB1P53618 RNU6-212P-201ENST00000362642 104 ntBASIC2.74□□□□□ -1.97
COPB1P53618 Y_RNA.183-201ENST00000363882 113 ntBASIC2.74□□□□□ -1.97
COPB1P53618 RNU6-806P-201ENST00000365147 105 ntBASIC2.74□□□□□ -1.97
COPB1P53618 RNU6-505P-201ENST00000384427 107 ntBASIC2.74□□□□□ -1.97
COPB1P53618 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.74□□□□□ -1.97
COPB1P53618 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.74□□□□□ -1.97
COPB1P53618 AC007215.1-201ENST00000464893 276 ntBASIC2.74□□□□□ -1.97
COPB1P53618 AL121594.1-201ENST00000475906 575 ntBASIC2.74□□□□□ -1.97
COPB1P53618 RPL23AP70-201ENST00000483361 460 ntBASIC2.74□□□□□ -1.97
COPB1P53618 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.74□□□□□ -1.97
COPB1P53618 RAC1P5-201ENST00000512182 576 ntBASIC2.74□□□□□ -1.97
COPB1P53618 RNU6-397P-201ENST00000516226 104 ntBASIC2.74□□□□□ -1.97
COPB1P53618 RNU6-567P-201ENST00000516746 107 ntBASIC2.74□□□□□ -1.97
COPB1P53618 UBL5P4-201ENST00000562584 236 ntBASIC2.74□□□□□ -1.97
COPB1P53618 CYP4A27P-201ENST00000567218 190 ntBASIC2.74□□□□□ -1.97
COPB1P53618 AC125232.2-201ENST00000592457 143 ntBASIC2.74□□□□□ -1.97
COPB1P53618 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.74□□□□□ -1.97
COPB1P53618 AL137847.3-201ENST00000611521 109 ntBASIC2.74□□□□□ -1.97
COPB1P53618 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COPB1P53618 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.74□□□□□ -1.97
COPB1P53618 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
COPB1P53618 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
COPB1P53618 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COPB1P53618 RNU6-1159P-201ENST00000362933 107 ntBASIC2.73□□□□□ -1.97
COPB1P53618 Y_RNA.105-201ENST00000363182 111 ntBASIC2.73□□□□□ -1.97
COPB1P53618 RNA5SP456-201ENST00000364002 114 ntBASIC2.73□□□□□ -1.97
COPB1P53618 RNU6-472P-201ENST00000384299 107 ntBASIC2.73□□□□□ -1.97
COPB1P53618 Y_RNA.556-201ENST00000384677 113 ntBASIC2.73□□□□□ -1.97
COPB1P53618 RNU6-121P-201ENST00000410525 99 ntBASIC2.73□□□□□ -1.97
COPB1P53618 OOSP1P1-201ENST00000423265 274 ntBASIC2.73□□□□□ -1.97
COPB1P53618 WARS2P1-201ENST00000429678 537 ntBASIC2.73□□□□□ -1.97
COPB1P53618 AC112771.1-201ENST00000463581 102 ntBASIC2.73□□□□□ -1.97
COPB1P53618 RPL36AP48-201ENST00000485521 314 ntBASIC2.73□□□□□ -1.97
COPB1P53618 SEM1P1-201ENST00000506694 209 ntBASIC2.73□□□□□ -1.97
COPB1P53618 AC096725.1-201ENST00000514266 313 ntBASIC2.73□□□□□ -1.97
COPB1P53618 SCARNA17.1-201ENST00000516211 143 ntBASIC2.73□□□□□ -1.97
COPB1P53618 Y_RNA.668-201ENST00000516233 93 ntBASIC2.73□□□□□ -1.97
COPB1P53618 SCARNA17.2-201ENST00000516334 143 ntBASIC2.73□□□□□ -1.97
COPB1P53618 RNU6-1198P-201ENST00000516904 67 ntBASIC2.73□□□□□ -1.97
COPB1P53618 AL034555.1-201ENST00000604816 211 ntBASIC2.73□□□□□ -1.97
COPB1P53618 AL138963.2-201ENST00000605137 226 ntBASIC2.73□□□□□ -1.97
COPB1P53618 SCARNA17.4-201ENST00000614296 143 ntBASIC2.73□□□□□ -1.97
COPB1P53618 AC240442.1-201ENST00000616055 283 ntBASIC2.73□□□□□ -1.97
COPB1P53618 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.73□□□□□ -1.97
COPB1P53618 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COPB1P53618 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COPB1P53618 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COPB1P53618 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COPB1P53618 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
COPB1P53618 AC062016.1-201ENST00000355719 319 ntBASIC2.72□□□□□ -1.97
COPB1P53618 Y_RNA.19-201ENST00000362462 99 ntBASIC2.72□□□□□ -1.97
COPB1P53618 RNU4-15P-201ENST00000362613 141 ntBASIC2.72□□□□□ -1.97
COPB1P53618 Y_RNA.64-201ENST00000362845 102 ntBASIC2.72□□□□□ -1.97
COPB1P53618 RNU6-702P-201ENST00000364982 107 ntBASIC2.72□□□□□ -1.97
COPB1P53618 Y_RNA.401-201ENST00000383965 117 ntBASIC2.72□□□□□ -1.97
COPB1P53618 RNU1-57P-201ENST00000384491 166 ntBASIC2.72□□□□□ -1.97
COPB1P53618 RNU6-541P-201ENST00000384709 110 ntBASIC2.72□□□□□ -1.97
COPB1P53618 RNA5SP201-201ENST00000410316 124 ntBASIC2.72□□□□□ -1.97
COPB1P53618 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.72□□□□□ -1.97
COPB1P53618 LINC01399-202ENST00000458450 244 ntBASIC2.72□□□□□ -1.97
COPB1P53618 MRPS36P2-201ENST00000512569 299 ntBASIC2.72□□□□□ -1.97
COPB1P53618 AC073410.2-201ENST00000603240 332 ntBASIC2.72□□□□□ -1.97
COPB1P53618 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.72□□□□□ -1.97
COPB1P53618 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.72□□□□□ -1.97
COPB1P53618 UCA1.1-201ENST00000620952 75 ntBASIC2.72□□□□□ -1.97
COPB1P53618 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.72□□□□□ -1.97
COPB1P53618 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COPB1P53618 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COPB1P53618 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
COPB1P53618 AC007336.1-201ENST00000576365 3828 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC099654.7-201ENST00000635788 2127 ntBASIC2.71□□□□□ -1.98
COPB1P53618 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
COPB1P53618 RNA5SP361-201ENST00000362686 118 ntBASIC2.71□□□□□ -1.98
COPB1P53618 RNU6-859P-201ENST00000362728 107 ntBASIC2.71□□□□□ -1.98
COPB1P53618 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.71□□□□□ -1.98
COPB1P53618 Y_RNA.396-201ENST00000383949 103 ntBASIC2.71□□□□□ -1.98
COPB1P53618 MIR329-1-201ENST00000385028 80 ntBASIC2.71□□□□□ -1.98
COPB1P53618 CBX3P9-201ENST00000402326 552 ntBASIC2.71□□□□□ -1.98
COPB1P53618 RNU2-52P-201ENST00000410680 190 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC097463.2-201ENST00000421074 142 ntBASIC2.71□□□□□ -1.98
COPB1P53618 Z98742.2-201ENST00000431564 187 ntBASIC2.71□□□□□ -1.98
COPB1P53618 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.71□□□□□ -1.98
COPB1P53618 SNORD109B-201ENST00000458961 67 ntBASIC2.71□□□□□ -1.98
COPB1P53618 SNORD109A-201ENST00000459128 67 ntBASIC2.71□□□□□ -1.98
COPB1P53618 AC025465.3-201ENST00000510570 311 ntBASIC2.71□□□□□ -1.98
COPB1P53618 RNU6-1143P-201ENST00000516125 104 ntBASIC2.71□□□□□ -1.98
COPB1P53618 RNY3P15-201ENST00000516297 97 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms