Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.19□□□□□ -1.9
NEK4P51957 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NEK4P51957 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK4P51957 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
NEK4P51957 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEK4P51957 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK4P51957 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEK4P51957 Y_RNA.26-201ENST00000362539 101 ntBASIC3.18□□□□□ -1.9
NEK4P51957 Y_RNA.105-201ENST00000363182 111 ntBASIC3.18□□□□□ -1.9
NEK4P51957 Y_RNA.222-201ENST00000364264 102 ntBASIC3.18□□□□□ -1.9
NEK4P51957 RNU6-806P-201ENST00000365147 105 ntBASIC3.18□□□□□ -1.9
NEK4P51957 Y_RNA.452-201ENST00000384202 108 ntBASIC3.18□□□□□ -1.9
NEK4P51957 CBX3P6-201ENST00000430257 527 ntBASIC3.18□□□□□ -1.9
NEK4P51957 IPO7P1-201ENST00000442031 636 ntBASIC3.18□□□□□ -1.9
NEK4P51957 LINC01399-202ENST00000458450 244 ntBASIC3.18□□□□□ -1.9
NEK4P51957 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
NEK4P51957 AC025465.3-201ENST00000510570 311 ntBASIC3.18□□□□□ -1.9
NEK4P51957 SNORA40.9-201ENST00000515895 93 ntBASIC3.18□□□□□ -1.9
NEK4P51957 RNU6-344P-201ENST00000516635 111 ntBASIC3.18□□□□□ -1.9
NEK4P51957 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
NEK4P51957 MIR4325-201ENST00000583049 90 ntBASIC3.18□□□□□ -1.9
NEK4P51957 MIR4635-201ENST00000583759 79 ntBASIC3.18□□□□□ -1.9
NEK4P51957 MIR3616-201ENST00000584070 92 ntBASIC3.18□□□□□ -1.9
NEK4P51957 U4.1-201ENST00000620349 87 ntBASIC3.18□□□□□ -1.9
NEK4P51957 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEK4P51957 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
NEK4P51957 Y_RNA.64-201ENST00000362845 102 ntBASIC3.17□□□□□ -1.9
NEK4P51957 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
NEK4P51957 MIR95-201ENST00000385072 81 ntBASIC3.17□□□□□ -1.9
NEK4P51957 RNU6-220P-201ENST00000390919 107 ntBASIC3.17□□□□□ -1.9
NEK4P51957 RNA5SP210-201ENST00000391034 120 ntBASIC3.17□□□□□ -1.9
NEK4P51957 RNU6-121P-201ENST00000410525 99 ntBASIC3.17□□□□□ -1.9
NEK4P51957 AL135938.1-201ENST00000443141 297 ntBASIC3.17□□□□□ -1.9
NEK4P51957 AC009237.7-201ENST00000447357 229 ntBASIC3.17□□□□□ -1.9
NEK4P51957 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK4P51957 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK4P51957 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
NEK4P51957 AC018630.3-201ENST00000542637 96 ntBASIC3.17□□□□□ -1.9
NEK4P51957 AC079600.2-201ENST00000550076 130 ntBASIC3.17□□□□□ -1.9
NEK4P51957 AL161670.1-201ENST00000554348 137 ntBASIC3.17□□□□□ -1.9
NEK4P51957 MIR5006-201ENST00000583027 110 ntBASIC3.17□□□□□ -1.9
NEK4P51957 MIR3149-201ENST00000584629 83 ntBASIC3.17□□□□□ -1.9
NEK4P51957 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK4P51957 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.17□□□□□ -1.9
NEK4P51957 MIR8062-201ENST00000621515 85 ntBASIC3.17□□□□□ -1.9
NEK4P51957 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
NEK4P51957 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NEK4P51957 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEK4P51957 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.16□□□□□ -1.9
NEK4P51957 Y_RNA.143-201ENST00000363520 106 ntBASIC3.16□□□□□ -1.9
NEK4P51957 SNORA44-201ENST00000384584 132 ntBASIC3.16□□□□□ -1.9
NEK4P51957 SNORD115-46-201ENST00000390982 71 ntBASIC3.16□□□□□ -1.9
NEK4P51957 FO393413.1-201ENST00000402892 195 ntBASIC3.16□□□□□ -1.9
NEK4P51957 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.16□□□□□ -1.9
NEK4P51957 AL139281.1-201ENST00000422120 335 ntBASIC3.16□□□□□ -1.9
NEK4P51957 ARL5AP4-201ENST00000430731 512 ntBASIC3.16□□□□□ -1.9
NEK4P51957 IFNA11P-201ENST00000446352 526 ntBASIC3.16□□□□□ -1.9
NEK4P51957 EEF1B2P7-201ENST00000451177 676 ntBASIC3.16□□□□□ -1.9
NEK4P51957 S100A11P2-201ENST00000467589 312 ntBASIC3.16□□□□□ -1.9
NEK4P51957 AC074133.1-201ENST00000515696 183 ntBASIC3.16□□□□□ -1.9
NEK4P51957 AC233702.2-202ENST00000562547 291 ntBASIC3.16□□□□□ -1.9
NEK4P51957 AC136932.1-201ENST00000574771 208 ntBASIC3.16□□□□□ -1.9
NEK4P51957 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.16□□□□□ -1.9
NEK4P51957 LINC02555-201ENST00000563933 1951 ntBASIC3.16□□□□□ -1.9
NEK4P51957 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.15□□□□□ -1.9
NEK4P51957 Y_RNA.556-201ENST00000384677 113 ntBASIC3.15□□□□□ -1.91
NEK4P51957 RNU6-713P-201ENST00000384761 107 ntBASIC3.15□□□□□ -1.91
NEK4P51957 MIR1294-201ENST00000408503 142 ntBASIC3.15□□□□□ -1.91
NEK4P51957 AC087499.2-201ENST00000432861 149 ntBASIC3.15□□□□□ -1.91
NEK4P51957 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.15□□□□□ -1.91
NEK4P51957 AL161788.1-201ENST00000441805 169 ntBASIC3.15□□□□□ -1.91
NEK4P51957 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.15□□□□□ -1.91
NEK4P51957 CYP2C59P-201ENST00000457790 269 ntBASIC3.15□□□□□ -1.91
NEK4P51957 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.15□□□□□ -1.91
NEK4P51957 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.15□□□□□ -1.91
NEK4P51957 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.15□□□□□ -1.91
NEK4P51957 RRN3P3-201ENST00000549207 578 ntBASIC3.15□□□□□ -1.91
NEK4P51957 MIR5195-201ENST00000583555 115 ntBASIC3.15□□□□□ -1.91
NEK4P51957 MIR3117-201ENST00000584034 78 ntBASIC3.15□□□□□ -1.91
NEK4P51957 AL356280.1-201ENST00000603614 379 ntBASIC3.15□□□□□ -1.91
NEK4P51957 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.15□□□□□ -1.91
NEK4P51957 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.91
NEK4P51957 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.15□□□□□ -1.91
NEK4P51957 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEK4P51957 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEK4P51957 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
NEK4P51957 RNU6-727P-201ENST00000363592 107 ntBASIC3.14□□□□□ -1.91
NEK4P51957 RNU6-961P-201ENST00000363893 105 ntBASIC3.14□□□□□ -1.91
NEK4P51957 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.14□□□□□ -1.91
NEK4P51957 SNORD63-201ENST00000384262 68 ntBASIC3.14□□□□□ -1.91
NEK4P51957 Y_RNA.462-201ENST00000384268 102 ntBASIC3.14□□□□□ -1.91
NEK4P51957 MIR627-201ENST00000384979 97 ntBASIC3.14□□□□□ -1.91
NEK4P51957 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NEK4P51957 AL033519.2-201ENST00000403958 392 ntBASIC3.14□□□□□ -1.91
NEK4P51957 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEK4P51957 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
NEK4P51957 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.14□□□□□ -1.91
NEK4P51957 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.14□□□□□ -1.91
NEK4P51957 RNU6-408P-201ENST00000515910 100 ntBASIC3.14□□□□□ -1.91
NEK4P51957 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms