Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK3P49761 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK3P49761 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.93□□□□□ -1.94
CLK3P49761 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
CLK3P49761 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.93□□□□□ -1.94
CLK3P49761 RNU6-961P-201ENST00000363893 105 ntBASIC2.93□□□□□ -1.94
CLK3P49761 RNU1-100P-201ENST00000365255 165 ntBASIC2.93□□□□□ -1.94
CLK3P49761 RNVU1-14-201ENST00000384770 164 ntBASIC2.93□□□□□ -1.94
CLK3P49761 SNORA11-201ENST00000408789 128 ntBASIC2.93□□□□□ -1.94
CLK3P49761 RNU6-1135P-201ENST00000411083 103 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AC009414.1-201ENST00000427200 443 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK3P49761 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK3P49761 RPL39P40-201ENST00000445481 146 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.93□□□□□ -1.94
CLK3P49761 AC091153.1-201ENST00000466297 402 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.93□□□□□ -1.94
CLK3P49761 AP005660.1-201ENST00000522972 293 ntBASIC2.93□□□□□ -1.94
CLK3P49761 CR383656.8-201ENST00000549046 145 ntBASIC2.93□□□□□ -1.94
CLK3P49761 RPL21P9-201ENST00000556149 474 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.93□□□□□ -1.94
CLK3P49761 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.93□□□□□ -1.94
CLK3P49761 UBL5P4-201ENST00000562584 236 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AC020895.1-201ENST00000595362 272 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AC104465.1-201ENST00000611365 139 ntBASIC2.93□□□□□ -1.94
CLK3P49761 uc_338.25-201ENST00000613756 156 ntBASIC2.93□□□□□ -1.94
CLK3P49761 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AC006001.4-201ENST00000622243 395 ntBASIC2.93□□□□□ -1.94
CLK3P49761 AL355596.1-201ENST00000565399 3996 ntBASIC2.93□□□□□ -1.94
CLK3P49761 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
CLK3P49761 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLK3P49761 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK3P49761 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLK3P49761 Y_RNA.8-201ENST00000362353 102 ntBASIC2.92□□□□□ -1.94
CLK3P49761 RNU6-923P-201ENST00000364753 107 ntBASIC2.92□□□□□ -1.94
CLK3P49761 SNORD50B-201ENST00000364995 70 ntBASIC2.92□□□□□ -1.94
CLK3P49761 Y_RNA.331-201ENST00000365267 102 ntBASIC2.92□□□□□ -1.94
CLK3P49761 Y_RNA.441-201ENST00000384123 112 ntBASIC2.92□□□□□ -1.94
CLK3P49761 SNORD116-20-201ENST00000384529 92 ntBASIC2.92□□□□□ -1.94
CLK3P49761 SNORD15B-201ENST00000384714 146 ntBASIC2.92□□□□□ -1.94
CLK3P49761 AL358075.3-201ENST00000426289 226 ntBASIC2.92□□□□□ -1.94
CLK3P49761 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK3P49761 AC007969.2-201ENST00000441891 191 ntBASIC2.92□□□□□ -1.94
CLK3P49761 UQCRBP2-201ENST00000447827 297 ntBASIC2.92□□□□□ -1.94
CLK3P49761 MRPS10P1-201ENST00000448483 130 ntBASIC2.92□□□□□ -1.94
CLK3P49761 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.92□□□□□ -1.94
CLK3P49761 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.92□□□□□ -1.94
CLK3P49761 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK3P49761 MIR4308-201ENST00000580634 81 ntBASIC2.92□□□□□ -1.94
CLK3P49761 AC005176.2-201ENST00000596933 147 ntBASIC2.92□□□□□ -1.94
CLK3P49761 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.92□□□□□ -1.94
CLK3P49761 AL109809.4-201ENST00000603520 2185 ntBASIC2.92□□□□□ -1.94
CLK3P49761 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLK3P49761 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLK3P49761 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK3P49761 AC135776.4-201ENST00000624300 1904 ntBASIC2.91□□□□□ -1.94
CLK3P49761 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLK3P49761 SNORD56.1-201ENST00000362913 68 ntBASIC2.91□□□□□ -1.94
CLK3P49761 Y_RNA.217-201ENST00000364214 105 ntBASIC2.91□□□□□ -1.94
CLK3P49761 Y_RNA.308-201ENST00000365043 101 ntBASIC2.91□□□□□ -1.94
CLK3P49761 Y_RNA.398-201ENST00000383952 99 ntBASIC2.91□□□□□ -1.94
CLK3P49761 RNU6-19P-201ENST00000384718 107 ntBASIC2.91□□□□□ -1.94
CLK3P49761 AC074117.2-201ENST00000417130 397 ntBASIC2.91□□□□□ -1.94
CLK3P49761 Y_RNA.641-201ENST00000459414 105 ntBASIC2.91□□□□□ -1.94
CLK3P49761 RPS29P12-201ENST00000460178 152 ntBASIC2.91□□□□□ -1.94
CLK3P49761 RN7SL863P-201ENST00000462370 296 ntBASIC2.91□□□□□ -1.94
CLK3P49761 AC016632.1-201ENST00000503994 196 ntBASIC2.91□□□□□ -1.94
CLK3P49761 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.91□□□□□ -1.94
CLK3P49761 RNU6-1219P-201ENST00000516143 112 ntBASIC2.91□□□□□ -1.94
CLK3P49761 RN7SKP43-201ENST00000516173 320 ntBASIC2.91□□□□□ -1.94
CLK3P49761 RNY3P16-201ENST00000516338 101 ntBASIC2.91□□□□□ -1.94
CLK3P49761 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK3P49761 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.91□□□□□ -1.94
CLK3P49761 MIR2682-201ENST00000580305 110 ntBASIC2.91□□□□□ -1.94
CLK3P49761 AC019159.1-201ENST00000605094 187 ntBASIC2.91□□□□□ -1.94
CLK3P49761 AC022441.3-201ENST00000605737 136 ntBASIC2.91□□□□□ -1.94
CLK3P49761 UCA1.1-201ENST00000620952 75 ntBASIC2.91□□□□□ -1.94
CLK3P49761 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLK3P49761 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK3P49761 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK3P49761 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLK3P49761 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CLK3P49761 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CLK3P49761 SNORD46.1-201ENST00000364139 104 ntBASIC2.9□□□□□ -1.95
CLK3P49761 RNU6-1141P-201ENST00000364520 107 ntBASIC2.9□□□□□ -1.95
CLK3P49761 Y_RNA.262-201ENST00000364641 102 ntBASIC2.9□□□□□ -1.95
CLK3P49761 RNU6-1117P-201ENST00000384525 104 ntBASIC2.9□□□□□ -1.95
CLK3P49761 FTH1P15-201ENST00000406984 280 ntBASIC2.9□□□□□ -1.95
CLK3P49761 Y_RNA.597-201ENST00000410463 100 ntBASIC2.9□□□□□ -1.95
CLK3P49761 RN7SKP61-201ENST00000410642 295 ntBASIC2.9□□□□□ -1.95
CLK3P49761 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.9□□□□□ -1.95
CLK3P49761 PTGES3P4-201ENST00000426243 356 ntBASIC2.9□□□□□ -1.95
CLK3P49761 GPM6BP3-201ENST00000442797 145 ntBASIC2.9□□□□□ -1.95
CLK3P49761 AC005042.3-201ENST00000453230 174 ntBASIC2.9□□□□□ -1.95
CLK3P49761 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.9□□□□□ -1.95
CLK3P49761 RNU6-56P-201ENST00000516986 93 ntBASIC2.9□□□□□ -1.95
CLK3P49761 ACA59.2-201ENST00000517061 156 ntBASIC2.9□□□□□ -1.95
CLK3P49761 HSPE1P4-201ENST00000550617 308 ntBASIC2.9□□□□□ -1.95
CLK3P49761 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.9□□□□□ -1.95
CLK3P49761 AC091152.3-201ENST00000604227 325 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms