Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SCARNA17.1-201ENST00000516211 143 ntBASIC3.47□□□□□ -1.85
CCNFP41002 SCARNA17.2-201ENST00000516334 143 ntBASIC3.47□□□□□ -1.85
CCNFP41002 AC103810.1-201ENST00000579873 453 ntBASIC3.47□□□□□ -1.85
CCNFP41002 MIR3133-201ENST00000583157 78 ntBASIC3.47□□□□□ -1.85
CCNFP41002 SCARNA17.4-201ENST00000614296 143 ntBASIC3.47□□□□□ -1.85
CCNFP41002 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.47□□□□□ -1.85
CCNFP41002 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCNFP41002 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCNFP41002 RNA5SP124-201ENST00000362739 110 ntBASIC3.46□□□□□ -1.86
CCNFP41002 Y_RNA.233-201ENST00000364407 101 ntBASIC3.46□□□□□ -1.86
CCNFP41002 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.46□□□□□ -1.86
CCNFP41002 EIF4EP4-201ENST00000424916 578 ntBASIC3.46□□□□□ -1.86
CCNFP41002 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.46□□□□□ -1.86
CCNFP41002 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.46□□□□□ -1.86
CCNFP41002 HMGN1P18-201ENST00000457642 277 ntBASIC3.46□□□□□ -1.86
CCNFP41002 RPS29P12-201ENST00000460178 152 ntBASIC3.46□□□□□ -1.86
CCNFP41002 RNU6-436P-201ENST00000516171 114 ntBASIC3.46□□□□□ -1.86
CCNFP41002 RNU6-255P-201ENST00000516957 105 ntBASIC3.46□□□□□ -1.86
CCNFP41002 RNU2-12P-201ENST00000517216 168 ntBASIC3.46□□□□□ -1.86
CCNFP41002 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
CCNFP41002 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.46□□□□□ -1.86
CCNFP41002 AC104027.1-201ENST00000521887 300 ntBASIC3.46□□□□□ -1.86
CCNFP41002 AP005660.1-201ENST00000522972 293 ntBASIC3.46□□□□□ -1.86
CCNFP41002 AL365265.1-201ENST00000621045 234 ntBASIC3.46□□□□□ -1.86
CCNFP41002 AC039056.2-201ENST00000622261 511 ntBASIC3.46□□□□□ -1.86
CCNFP41002 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CCNFP41002 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.46□□□□□ -1.86
CCNFP41002 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CCNFP41002 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.45□□□□□ -1.86
CCNFP41002 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCNFP41002 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCNFP41002 RNU6-1305P-201ENST00000364353 104 ntBASIC3.45□□□□□ -1.86
CCNFP41002 SNORA73.2-201ENST00000364946 201 ntBASIC3.45□□□□□ -1.86
CCNFP41002 RNU6-918P-201ENST00000391219 106 ntBASIC3.45□□□□□ -1.86
CCNFP41002 RNA5SP504-201ENST00000410676 117 ntBASIC3.45□□□□□ -1.86
CCNFP41002 DBIP2-201ENST00000419076 262 ntBASIC3.45□□□□□ -1.86
CCNFP41002 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.45□□□□□ -1.86
CCNFP41002 AC106707.2-201ENST00000484182 374 ntBASIC3.45□□□□□ -1.86
CCNFP41002 SEM1P1-201ENST00000506694 209 ntBASIC3.45□□□□□ -1.86
CCNFP41002 HMGB3P3-201ENST00000510526 400 ntBASIC3.45□□□□□ -1.86
CCNFP41002 AC104619.4-201ENST00000510773 249 ntBASIC3.45□□□□□ -1.86
CCNFP41002 RNU5F-4P-201ENST00000516581 114 ntBASIC3.45□□□□□ -1.86
CCNFP41002 AC026403.1-201ENST00000518938 295 ntBASIC3.45□□□□□ -1.86
CCNFP41002 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
CCNFP41002 AL034408.1-202ENST00000636088 415 ntBASIC3.45□□□□□ -1.86
CCNFP41002 AC009093.8-201ENST00000641769 292 ntBASIC3.45□□□□□ -1.86
CCNFP41002 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCNFP41002 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCNFP41002 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CCNFP41002 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCNFP41002 RNU6-1272P-201ENST00000362776 107 ntBASIC3.44□□□□□ -1.86
CCNFP41002 RNU6-746P-201ENST00000384112 109 ntBASIC3.44□□□□□ -1.86
CCNFP41002 RNU6-187P-201ENST00000384139 106 ntBASIC3.44□□□□□ -1.86
CCNFP41002 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
CCNFP41002 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCNFP41002 GOT2P5-201ENST00000433995 546 ntBASIC3.44□□□□□ -1.86
CCNFP41002 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CCNFP41002 PRSS3P4-201ENST00000453323 162 ntBASIC3.44□□□□□ -1.86
CCNFP41002 RPL23AP67-201ENST00000465341 474 ntBASIC3.44□□□□□ -1.86
CCNFP41002 MIR449C-201ENST00000516047 92 ntBASIC3.44□□□□□ -1.86
CCNFP41002 SNORA70.18-201ENST00000516696 98 ntBASIC3.44□□□□□ -1.86
CCNFP41002 AC009127.3-201ENST00000570531 403 ntBASIC3.44□□□□□ -1.86
CCNFP41002 AC012442.3-202ENST00000636742 206 ntBASIC3.44□□□□□ -1.86
CCNFP41002 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.44□□□□□ -1.86
CCNFP41002 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.44□□□□□ -1.86
CCNFP41002 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCNFP41002 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNFP41002 AC017071.1-201ENST00000564407 2204 ntBASIC3.43□□□□□ -1.86
CCNFP41002 AL356274.2-201ENST00000624379 3752 ntBASIC3.43□□□□□ -1.86
CCNFP41002 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCNFP41002 MIR148B-201ENST00000362252 99 ntBASIC3.43□□□□□ -1.86
CCNFP41002 Y_RNA.8-201ENST00000362353 102 ntBASIC3.43□□□□□ -1.86
CCNFP41002 SNORA71.3-201ENST00000362582 128 ntBASIC3.43□□□□□ -1.86
CCNFP41002 RNU6-486P-201ENST00000363116 107 ntBASIC3.43□□□□□ -1.86
CCNFP41002 OOSP1P1-201ENST00000423265 274 ntBASIC3.43□□□□□ -1.86
CCNFP41002 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNFP41002 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNFP41002 SCARNA20.6-201ENST00000517251 106 ntBASIC3.43□□□□□ -1.86
CCNFP41002 MIR4308-201ENST00000580634 81 ntBASIC3.43□□□□□ -1.86
CCNFP41002 SNORA51-201ENST00000606420 132 ntBASIC3.43□□□□□ -1.86
CCNFP41002 AL008718.3-201ENST00000610217 321 ntBASIC3.43□□□□□ -1.86
CCNFP41002 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCNFP41002 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCNFP41002 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
CCNFP41002 MIR208A-201ENST00000362287 71 ntBASIC3.42□□□□□ -1.86
CCNFP41002 SNORA63.1-201ENST00000362493 131 ntBASIC3.42□□□□□ -1.86
CCNFP41002 RNU1-35P-201ENST00000362782 153 ntBASIC3.42□□□□□ -1.86
CCNFP41002 SNORD56.3-201ENST00000363507 71 ntBASIC3.42□□□□□ -1.86
CCNFP41002 RNA5SP387-201ENST00000364226 106 ntBASIC3.42□□□□□ -1.86
CCNFP41002 Y_RNA.333-201ENST00000365274 102 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AL031003.1-201ENST00000404229 172 ntBASIC3.42□□□□□ -1.86
CCNFP41002 TOMM22P2-201ENST00000430735 237 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AC146507.2-201ENST00000460608 476 ntBASIC3.42□□□□□ -1.86
CCNFP41002 RNU6-789P-201ENST00000517105 102 ntBASIC3.42□□□□□ -1.86
CCNFP41002 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCNFP41002 AL133393.1-201ENST00000603277 287 ntBASIC3.42□□□□□ -1.86
CCNFP41002 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AC104465.1-201ENST00000611365 139 ntBASIC3.42□□□□□ -1.86
CCNFP41002 AC084757.4-201ENST00000616350 526 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms