Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CYP3A52P-201ENST00000563326 91 ntBASIC1.05□□□□□ -2.24
RFC3P40938 TCL6_2.1-201ENST00000615162 119 ntBASIC1.05□□□□□ -2.24
RFC3P40938 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
RFC3P40938 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RFC3P40938 RNU6-534P-201ENST00000364877 106 ntBASIC1.04□□□□□ -2.24
RFC3P40938 RNU6-996P-201ENST00000365438 107 ntBASIC1.04□□□□□ -2.24
RFC3P40938 SNORA29-201ENST00000384183 140 ntBASIC1.04□□□□□ -2.24
RFC3P40938 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RFC3P40938 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
RFC3P40938 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.04□□□□□ -2.24
RFC3P40938 SNX2P2-201ENST00000424553 323 ntBASIC1.04□□□□□ -2.24
RFC3P40938 USP9YP14-201ENST00000430663 563 ntBASIC1.04□□□□□ -2.24
RFC3P40938 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.04□□□□□ -2.24
RFC3P40938 AC073415.1-201ENST00000449240 153 ntBASIC1.04□□□□□ -2.24
RFC3P40938 RPS29P27-201ENST00000463711 170 ntBASIC1.04□□□□□ -2.24
RFC3P40938 AC114982.1-201ENST00000469402 321 ntBASIC1.04□□□□□ -2.24
RFC3P40938 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
RFC3P40938 RPL39P5-202ENST00000512505 151 ntBASIC1.04□□□□□ -2.24
RFC3P40938 MTND4P7-201ENST00000523876 130 ntBASIC1.04□□□□□ -2.24
RFC3P40938 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.04□□□□□ -2.24
RFC3P40938 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
RFC3P40938 MIR4452-201ENST00000583004 71 ntBASIC1.04□□□□□ -2.24
RFC3P40938 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
RFC3P40938 HULC.1-201ENST00000612720 240 ntBASIC1.04□□□□□ -2.24
RFC3P40938 uc_338.34-201ENST00000617467 174 ntBASIC1.04□□□□□ -2.24
RFC3P40938 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.04□□□□□ -2.24
RFC3P40938 RNA5SP327-201ENST00000362494 101 ntBASIC1.03□□□□□ -2.24
RFC3P40938 RNU5B-2P-201ENST00000363036 113 ntBASIC1.03□□□□□ -2.24
RFC3P40938 Y_RNA.118-201ENST00000363300 101 ntBASIC1.03□□□□□ -2.24
RFC3P40938 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
RFC3P40938 SNORA4.2-201ENST00000365313 147 ntBASIC1.03□□□□□ -2.24
RFC3P40938 RNU6-975P-201ENST00000384296 105 ntBASIC1.03□□□□□ -2.24
RFC3P40938 MIR515-2-201ENST00000384883 83 ntBASIC1.03□□□□□ -2.24
RFC3P40938 MIR515-1-201ENST00000384884 83 ntBASIC1.03□□□□□ -2.24
RFC3P40938 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.03□□□□□ -2.24
RFC3P40938 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.03□□□□□ -2.24
RFC3P40938 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.03□□□□□ -2.24
RFC3P40938 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.03□□□□□ -2.24
RFC3P40938 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.03□□□□□ -2.24
RFC3P40938 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
RFC3P40938 CCDC34P1-201ENST00000507441 517 ntBASIC1.03□□□□□ -2.24
RFC3P40938 SNORA14.1-201ENST00000516113 141 ntBASIC1.03□□□□□ -2.24
RFC3P40938 AL512310.8-201ENST00000550183 120 ntBASIC1.03□□□□□ -2.24
RFC3P40938 AL442163.3-201ENST00000554110 156 ntBASIC1.03□□□□□ -2.24
RFC3P40938 MIR4709-201ENST00000577272 72 ntBASIC1.03□□□□□ -2.24
RFC3P40938 MIR5006-201ENST00000583027 110 ntBASIC1.03□□□□□ -2.24
RFC3P40938 AC016727.2-201ENST00000603988 621 ntBASIC1.03□□□□□ -2.24
RFC3P40938 AL355802.3-201ENST00000607571 545 ntBASIC1.03□□□□□ -2.24
RFC3P40938 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RFC3P40938 snoU2-30.2-201ENST00000362805 70 ntBASIC1.02□□□□□ -2.25
RFC3P40938 RNA5SP219-201ENST00000390940 113 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
RFC3P40938 HMGN2P34-201ENST00000437647 269 ntBASIC1.02□□□□□ -2.25
RFC3P40938 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.02□□□□□ -2.25
RFC3P40938 AC004386.2-201ENST00000441858 148 ntBASIC1.02□□□□□ -2.25
RFC3P40938 MTCO2P18-201ENST00000457151 658 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AC025465.4-201ENST00000513422 638 ntBASIC1.02□□□□□ -2.25
RFC3P40938 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.02□□□□□ -2.25
RFC3P40938 RNU6-1146P-201ENST00000516282 102 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.02□□□□□ -2.25
RFC3P40938 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
RFC3P40938 MTATP6P24-201ENST00000576835 677 ntBASIC1.02□□□□□ -2.25
RFC3P40938 MIR4424-201ENST00000585257 86 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AC040904.1-201ENST00000590850 223 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AC136443.5-201ENST00000603741 370 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AC104458.1-201ENST00000608243 463 ntBASIC1.02□□□□□ -2.25
RFC3P40938 AC009033.1-201ENST00000624279 431 ntBASIC1.02□□□□□ -2.25
RFC3P40938 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RFC3P40938 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RFC3P40938 RNU6-1286P-201ENST00000383871 107 ntBASIC1.01□□□□□ -2.25
RFC3P40938 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
RFC3P40938 RNU5A-6P-201ENST00000384136 116 ntBASIC1.01□□□□□ -2.25
RFC3P40938 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
RFC3P40938 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
RFC3P40938 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.01□□□□□ -2.25
RFC3P40938 SNRPEP10-201ENST00000420249 274 ntBASIC1.01□□□□□ -2.25
RFC3P40938 AC009237.7-201ENST00000447357 229 ntBASIC1.01□□□□□ -2.25
RFC3P40938 NFU1P2-201ENST00000448700 469 ntBASIC1.01□□□□□ -2.25
RFC3P40938 AC016717.1-201ENST00000448918 286 ntBASIC1.01□□□□□ -2.25
RFC3P40938 RPS26P45-201ENST00000471748 340 ntBASIC1.01□□□□□ -2.25
RFC3P40938 MTND3P7-201ENST00000474435 343 ntBASIC1.01□□□□□ -2.25
RFC3P40938 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.01□□□□□ -2.25
RFC3P40938 AC010493.1-201ENST00000513479 292 ntBASIC1.01□□□□□ -2.25
RFC3P40938 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.01□□□□□ -2.25
RFC3P40938 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.01□□□□□ -2.25
RFC3P40938 MIR4742-201ENST00000581069 85 ntBASIC1.01□□□□□ -2.25
RFC3P40938 AC004223.2-201ENST00000590309 544 ntBASIC1.01□□□□□ -2.25
RFC3P40938 AC009509.4-201ENST00000619202 509 ntBASIC1.01□□□□□ -2.25
RFC3P40938 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
RFC3P40938 RNU6-1123P-201ENST00000362347 106 ntBASIC1□□□□□ -2.25
RFC3P40938 Y_RNA.116-201ENST00000363292 103 ntBASIC1□□□□□ -2.25
RFC3P40938 Y_RNA.122-201ENST00000363331 96 ntBASIC1□□□□□ -2.25
RFC3P40938 SNORA33-201ENST00000363664 130 ntBASIC1□□□□□ -2.25
RFC3P40938 Y_RNA.355-201ENST00000365462 98 ntBASIC1□□□□□ -2.25
RFC3P40938 RNU6-1103P-201ENST00000384150 107 ntBASIC1□□□□□ -2.25
RFC3P40938 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
RFC3P40938 RNA5SP494-201ENST00000410653 129 ntBASIC1□□□□□ -2.25
RFC3P40938 RPL37P10-201ENST00000412884 288 ntBASIC1□□□□□ -2.25
RFC3P40938 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms