Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.76□□□□□ -1.81
PDE6BP35913 AL109933.2-201ENST00000452651 260 ntBASIC3.76□□□□□ -1.81
PDE6BP35913 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.76□□□□□ -1.81
PDE6BP35913 snoU13.28-201ENST00000459235 104 ntBASIC3.76□□□□□ -1.81
PDE6BP35913 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.76□□□□□ -1.81
PDE6BP35913 MIR2276-201ENST00000516886 89 ntBASIC3.76□□□□□ -1.81
PDE6BP35913 MIR4435-1-201ENST00000582552 80 ntBASIC3.76□□□□□ -1.81
PDE6BP35913 AC008749.1-201ENST00000597650 306 ntBASIC3.76□□□□□ -1.81
PDE6BP35913 RNU6-1290P-201ENST00000362957 109 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 Y_RNA.81-201ENST00000362997 102 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 RNU6-778P-201ENST00000363269 103 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 SNORD32A-201ENST00000364805 84 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 RNU6-1130P-201ENST00000365434 107 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 SNORA29-201ENST00000384183 140 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 MIR518D-201ENST00000385014 87 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 MIR329-1-201ENST00000385028 80 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PDE6BP35913 RNU2-51P-201ENST00000410708 197 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 RNU6-1001P-201ENST00000411265 100 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.75□□□□□ -1.81
PDE6BP35913 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.75□□□□□ -1.81
PDE6BP35913 AC010401.1-201ENST00000463867 348 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 RNU6-928P-201ENST00000516876 104 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 AC107016.2-201ENST00000547968 190 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 UBL5P4-201ENST00000562584 236 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.75□□□□□ -1.81
PDE6BP35913 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.75□□□□□ -1.81
PDE6BP35913 AC024153.1-201ENST00000603103 365 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 AC037487.3-201ENST00000606668 112 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 MAPK10-266ENST00000641066 6555 ntBASIC3.75□□□□□ -1.81
PDE6BP35913 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDE6BP35913 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDE6BP35913 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDE6BP35913 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.75□□□□□ -1.81
PDE6BP35913 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.74□□□□□ -1.81
PDE6BP35913 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDE6BP35913 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDE6BP35913 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDE6BP35913 Y_RNA.217-201ENST00000364214 105 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 Y_RNA.308-201ENST00000365043 101 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 RNU6-1145P-201ENST00000384246 107 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 RNU6-1117P-201ENST00000384525 104 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PDE6BP35913 AC063976.3-201ENST00000426849 329 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 Y_RNA.641-201ENST00000459414 105 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 RNU6-966P-201ENST00000516479 104 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.74□□□□□ -1.81
PDE6BP35913 AC110491.1-201ENST00000562191 2010 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.74□□□□□ -1.81
PDE6BP35913 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.74□□□□□ -1.81
PDE6BP35913 AC073349.3-201ENST00000617616 186 ntBASIC3.74□□□□□ -1.81
PDE6BP35913 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.74□□□□□ -1.81
PDE6BP35913 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDE6BP35913 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.73□□□□□ -1.81
PDE6BP35913 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDE6BP35913 RNU6-1175P-201ENST00000365200 107 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 RNU6-805P-201ENST00000365643 106 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 RNU6-22P-201ENST00000384355 107 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 U3.37-201ENST00000408528 213 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 RNU6-735P-201ENST00000410612 107 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 RPL23AP36-201ENST00000413895 458 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 TRIAP1P1-201ENST00000427062 225 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 WARS2P1-201ENST00000429678 537 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 AL031183.1-201ENST00000457667 207 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 SNORD19.2-201ENST00000516978 73 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 AC055872.1-201ENST00000570978 278 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
PDE6BP35913 AC096644.4-201ENST00000563417 2912 ntBASIC3.73□□□□□ -1.81
PDE6BP35913 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.73□□□□□ -1.81
PDE6BP35913 RBBP8P1-201ENST00000449447 1844 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 AC009487.2-201ENST00000420969 6821 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDE6BP35913 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 SNORA18.3-201ENST00000384122 132 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 Y_RNA.580-201ENST00000391004 95 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 RNU6-159P-201ENST00000391080 106 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 RPL23AP95-201ENST00000426806 265 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.72□□□□□ -1.81
PDE6BP35913 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.72□□□□□ -1.81
PDE6BP35913 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.72□□□□□ -1.81
PDE6BP35913 SNORA40.9-201ENST00000515895 93 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 RNU6-1183P-201ENST00000517054 60 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.72□□□□□ -1.81
PDE6BP35913 AC025281.1-201ENST00000567026 265 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 MIR5695-201ENST00000579717 85 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 AC005828.6-201ENST00000606610 232 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 AL357075.2-201ENST00000614906 189 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 AC005296.1-201ENST00000616145 209 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.72□□□□□ -1.81
PDE6BP35913 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PDE6BP35913 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PDE6BP35913 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.72□□□□□ -1.81
PDE6BP35913 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDE6BP35913 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
PDE6BP35913 RNA5SP432-201ENST00000362480 116 ntBASIC3.71□□□□□ -1.82
PDE6BP35913 RNU6-653P-201ENST00000363074 106 ntBASIC3.71□□□□□ -1.82
PDE6BP35913 RNU6-527P-201ENST00000363425 104 ntBASIC3.71□□□□□ -1.82
PDE6BP35913 Y_RNA.230-201ENST00000364348 109 ntBASIC3.71□□□□□ -1.82
PDE6BP35913 Y_RNA.319-201ENST00000365138 92 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms